RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 NFKBIL1Q9UBC1 381 aaPredicted RBP13.91□□□□□ -0.18
MACF1-223ENST00000496360 EDARQ9UNE0 448 aa13.91□□□□□ -0.18
MACF1-223ENST00000496360 SIRT4Q9Y6E7 314 aaPredicted RBP13.91□□□□□ -0.18
MACF1-223ENST00000496360 FXYD6-FXYD2A0A087WZ82 144 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 M0R3H8 397 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 DVL2O14641 736 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 SSX5O60225 188 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 RLN2P04090 185 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 GP1BAP07359 652 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 ATF1P18846 271 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 VIPR1P32241 457 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 FRKP42685 505 aaPredicted RBP13.9□□□□□ -0.18
MACF1-223ENST00000496360 OMPP47874 163 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 ST3GAL3Q11203 375 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 ELAVL2Q12926 359 aaKnown RBP13.9□□□□□ -0.18
MACF1-223ENST00000496360 ACSM3Q53FZ2 586 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 RNASE12Q5GAN4 147 aaKnown RBP13.9□□□□□ -0.18
MACF1-223ENST00000496360 ZNF311Q5JNZ3 666 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 ADGRF1Q5T601 910 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 AVPI1Q5T686 147 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 MEPCEQ7L2J0 689 aaKnown RBP13.9□□□□□ -0.18
MACF1-223ENST00000496360 SIRT6Q8N6T7 355 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 OR2T33Q8NG76 320 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 OR4Q3Q8NH05 313 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 OVCA2Q8WZ82 227 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 DMRTA2Q96SC8 542 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 SORBS1Q9BX66 1292 aaKnown RBP13.9□□□□□ -0.18
MACF1-223ENST00000496360 MFFQ9GZY8 342 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 FXYD6Q9H0Q3 95 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 KRCC1Q9NPI7 259 aaPredicted RBP13.9□□□□□ -0.18
MACF1-223ENST00000496360 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.9□□□□□ -0.18
MACF1-223ENST00000496360 PPIL1Q9Y3C6 166 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 DYRK1BQ9Y463 629 aa13.9□□□□□ -0.18
MACF1-223ENST00000496360 LINC00587B1AMM8 73 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 C1GALT1C1LP0DN25 315 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 MANFP55145 182 aaKnown RBP13.89□□□□□ -0.19
MACF1-223ENST00000496360 MLC1Q15049 377 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 DECR1Q16698 335 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 DMKNQ6E0U4 476 aaPredicted RBP13.89□□□□□ -0.19
MACF1-223ENST00000496360 LINGO2Q7L985 606 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 SUN3Q8TAQ9 357 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 SLC38A1Q9H2H9 487 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 TINAGQ9UJW2 476 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 FCF1Q9Y324 198 aaKnown RBP13.89□□□□□ -0.19
MACF1-223ENST00000496360 RFPL4AA6NLU0 287 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 RFPL4AL1F8VTS6 287 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 LCMT2O60294 686 aaKnown RBP13.89□□□□□ -0.19
MACF1-223ENST00000496360 ZNF821O75541 412 aaPredicted RBP13.89□□□□□ -0.19
MACF1-223ENST00000496360 KLHL18O94889 574 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 SIX6O95475 246 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 SNRPBP14678 240 aaKnown RBP13.89□□□□□ -0.19
MACF1-223ENST00000496360 SERPINA4P29622 427 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 STARP49675 285 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 ARFIP1P53367 373 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 TMEM255AQ5JRV8 349 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 C10orf91Q5T1B1 145 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 CRTC1Q6UUV9 634 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 APOOLQ6UXV4 268 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 TECPR1Q7Z6L1 1165 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 C12orf76Q8N812 135 aaPredicted RBP13.89□□□□□ -0.19
MACF1-223ENST00000496360 OR51G2Q8NGK0 314 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 OR6T1Q8NGN1 323 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 EPHX3Q9H6B9 360 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 AUNIPQ9H7T9 357 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 ZNF334Q9HCZ1 680 aaPredicted RBP13.89□□□□□ -0.19
MACF1-223ENST00000496360 ACSS1Q9NUB1 689 aaPredicted RBP13.89□□□□□ -0.19
MACF1-223ENST00000496360 SPHK1Q9NYA1 384 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 ERVK-19Q9WJR5 959 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 DTX4Q9Y2E6 619 aa13.89□□□□□ -0.19
MACF1-223ENST00000496360 CARHSP1Q9Y2V2 147 aaKnown RBP13.89□□□□□ -0.19
MACF1-223ENST00000496360 TMEM218A2RU14 115 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 SLC22A31A6NKX4 558 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 IMPA2O14732 288 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 SH3BGRLO75368 114 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 KLK1P06870 262 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 RAB40ALP0C0E4 278 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 NR2F1P10589 423 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 FOLR2P14207 255 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 GNSP15586 552 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 SPI1P17947 270 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 S100PP25815 95 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 MST1P26927 711 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 IMPA1P29218 277 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 GDI2P50395 445 aaKnown RBP13.88□□□□□ -0.19
MACF1-223ENST00000496360 ART1P52961 327 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 TAS2R41P59536 307 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 ZNF345Q14585 488 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 GUCA2BQ16661 112 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 PRSS53Q2L4Q9 553 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 RTP2Q5QGT7 225 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 NIPAL3Q6P499 406 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 CORO6Q6QEF8 472 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 ZNF620Q6ZNG0 422 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 TMPRSS11BQ86T26 416 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 ZNF671Q8TAW3 534 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 SLC2A12Q8TD20 617 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 RAB40AQ8WXH6 277 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 ACOT11Q8WXI4 607 aaPredicted RBP13.88□□□□□ -0.19
MACF1-223ENST00000496360 VOPP1Q96AW1 172 aa13.88□□□□□ -0.19
MACF1-223ENST00000496360 TIMP4Q99727 224 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms