RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ADAMTS15Q8TE58 950 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 SMAP2Q8WU79 429 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-212ENST00000492407 DYDC1Q8WWB3 177 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 KISS1RQ969F8 398 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-212ENST00000492407 S100PBPQ96BU1 408 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 COQ8BQ96D53 544 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 C16orf58Q96GQ5 468 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 ARL5BQ96KC2 179 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 ANKRD27Q96NW4 1050 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 TSSK3Q96PN8 268 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 TSC22D3Q99576 134 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 GATA5Q9BWX5 397 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-212ENST00000492407 POTEKPQ9BYX7 375 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 NMUR2Q9GZQ4 415 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 CENPHQ9H3R5 247 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 TUBB1Q9H4B7 451 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 BARX1Q9HBU1 254 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-212ENST00000492407 SIRT3Q9NTG7 399 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-212ENST00000492407 FBXO34Q9NWN3 711 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 KLHL9Q9P2J3 617 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 MBD2Q9UBB5 411 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 FAF1Q9UNN5 650 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-212ENST00000492407 LAMP3Q9UQV4 416 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 DTNAQ9Y4J8 743 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 TRAF6Q9Y4K3 522 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 HIVEP2P31629 2446 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 RAI1Q7Z5J4 1906 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-212ENST00000492407 GOLGA8QA0A0J9YX86 632 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 GOLGA8OA6NCC3 632 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 INAFM1C9JVW0 142 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 GOLGA8NF8WBI6 632 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 HAX1O00165 279 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 GTPBP1O00178 669 aaKnown RBP8.11□□□□□ -1.11
HDAC3-212ENST00000492407 SCAMP2O15127 329 aaKnown RBP8.11□□□□□ -1.11
HDAC3-212ENST00000492407 TLX2O43763 284 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-212ENST00000492407 EFNA2O43921 213 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 GMFGO60234 142 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 INMTO95050 263 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 ECDO95905 644 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-212ENST00000492407 PLAUP00749 431 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 FAM153BP0C7A2 387 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 LINC00032P0C843 101 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 PRKCAP17252 672 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 PRPS1L1P21108 318 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 OR3A2P47893 321 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 CCT3P49368 545 aaKnown RBP8.11□□□□□ -1.11
HDAC3-212ENST00000492407 C21orf58P58505 322 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 ZNF844Q08AG5 666 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 FAPQ12884 760 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 FOXF1Q12946 379 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 TNK1Q13470 666 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 TP53BP2Q13625 1128 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 PDK3Q15120 406 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 TAB1Q15750 504 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 CLEC12BQ2HXU8 276 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 SMU1Q2TAY7 513 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 TMEM176BQ3YBM2 270 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-212ENST00000492407 FAM153CQ494X1 144 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 ZNF672Q499Z4 452 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-212ENST00000492407 ARL13AQ5H913 290 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-212ENST00000492407 DCST2Q5T1A1 773 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 DNM1P46Q6ZS02 220 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 SZRD1Q7Z422 152 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 C10orf107Q8IVU9 208 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 GATSQ8NAP1 163 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 OR5W2Q8NH69 310 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 PHOSPHO1Q8TCT1 267 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 ZFP90Q8TF47 636 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 ABHD3Q8WU67 409 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 ST8SIA1Q92185 356 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 CDS1Q92903 461 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 SH3YL1Q96HL8 342 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-212ENST00000492407 ZIM3Q96PE6 472 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 NPAS1Q99742 590 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 AIFM2Q9BRQ8 373 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 C12orf49Q9H741 205 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 C12orf10Q9HB07 376 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 FAIMQ9NVQ4 179 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 EMC3Q9P0I2 261 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 BAIAP2L1Q9UHR4 511 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 FBN3Q75N90 2809 aa8.11□□□□□ -1.11
HDAC3-212ENST00000492407 OR6C65A6NJZ3 312 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 KIAA1324LA8MWY0 1029 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-212ENST00000492407 ZNF264O43296 627 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 DNPH1O43598 174 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 CYTIPO60759 359 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 PGM3O95394 542 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 NUDT14O95848 222 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 AGR2O95994 175 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 ADAP00813 363 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 OPN1LWP04000 364 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 LAMP1P11279 417 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 SLC7A1P30825 629 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 SFTPDP35247 375 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 CSNK2A1P68400 391 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-212ENST00000492407 MAD2L1Q13257 205 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-212ENST00000492407 CBFBQ13951 182 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 LASP1Q14847 261 aaKnown RBP8.1□□□□□ -1.11
HDAC3-212ENST00000492407 PCLAFQ15004 111 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 NRF1Q16656 503 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms