RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 OR5P2Q8WZ92 322 aa11.49□□□□□ -0.57
HDAC6-227ENST00000485102 JADE3Q92613 823 aa11.49□□□□□ -0.57
HDAC6-227ENST00000485102 ZNF524Q96C55 264 aa11.49□□□□□ -0.57
HDAC6-227ENST00000485102 DHRS9Q9BPW9 319 aa11.49□□□□□ -0.57
HDAC6-227ENST00000485102 THAP1Q9NVV9 213 aa11.49□□□□□ -0.57
HDAC6-227ENST00000485102 GPATCH2Q9NW75 528 aa11.49□□□□□ -0.57
HDAC6-227ENST00000485102 ZNF446Q9NWS9 450 aa11.49□□□□□ -0.57
HDAC6-227ENST00000485102 NPAP1Q9NZP6 1156 aa11.49□□□□□ -0.57
HDAC6-227ENST00000485102 SLC17A7Q9P2U7 560 aa11.49□□□□□ -0.57
HDAC6-227ENST00000485102 LPAR3Q9UBY5 353 aa11.49□□□□□ -0.57
HDAC6-227ENST00000485102 PRSS50Q9UI38 385 aa11.49□□□□□ -0.57
HDAC6-227ENST00000485102 DNAJC15Q9Y5T4 150 aa11.49□□□□□ -0.57
HDAC6-227ENST00000485102 PTGDR2Q9Y5Y4 395 aa11.49□□□□□ -0.57
HDAC6-227ENST00000485102 ARFGEF3Q5TH69 2177 aa11.49□□□□□ -0.57
HDAC6-227ENST00000485102 FAM234BA2RU67 622 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 E7EQL1 145 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 H7C417 338 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 GTPBP1O00178 669 aaKnown RBP11.48□□□□□ -0.57
HDAC6-227ENST00000485102 ZNF264O43296 627 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 EDNRAP25101 427 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 CCT3P49368 545 aaKnown RBP11.48□□□□□ -0.57
HDAC6-227ENST00000485102 IRX1P78414 480 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-227ENST00000485102 STK11Q15831 433 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 TTMPQ5BVD1 217 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 DCST2Q5T1A1 773 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 FBXW9Q5XUX1 488 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 CLEC2AQ6UVW9 174 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 TMPPEQ6ZT21 453 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 OR56A1Q8NGH5 318 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 LRRC8CQ8TDW0 803 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 ST8SIA1Q92185 356 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 PROX1Q92786 737 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 MOAP1Q96BY2 351 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 CACNG6Q9BXT2 260 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 NMUR2Q9GZQ4 415 aa11.48□□□□□ -0.57
HDAC6-227ENST00000485102 ANK2Q01484 3957 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 IGHV3-15A0A0B4J1V0 119 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 A0A1W2PNR3 127 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 SCAMP2O15127 329 aaKnown RBP11.47□□□□□ -0.57
HDAC6-227ENST00000485102 LYPLA1O75608 230 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-227ENST00000485102 H6PDO95479 791 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 CREB1P16220 341 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 NUDT6P53370 316 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 ABCE1P61221 599 aaKnown RBP11.47□□□□□ -0.57
HDAC6-227ENST00000485102 RPL38P63173 70 aaKnown RBP11.47□□□□□ -0.57
HDAC6-227ENST00000485102 CBFBQ13951 182 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 QPRTQ15274 297 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 RAB35Q15286 201 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 CHI3L2Q15782 390 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 ZNF141Q15928 474 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 KANK2Q63ZY3 851 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 ZNF544Q6NX49 715 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 MTDHQ86UE4 582 aaKnown RBP11.47□□□□□ -0.57
HDAC6-227ENST00000485102 LRRC34Q8IZ02 419 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 MUC15Q8N387 334 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 CLHC1Q8NHS4 586 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 SFXN5Q8TD22 340 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 OIT3Q8WWZ8 545 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 COQ8BQ96D53 544 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 OTUB1Q96FW1 271 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-227ENST00000485102 MUS81Q96NY9 551 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 ZNF300Q96RE9 604 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-227ENST00000485102 SDF2Q99470 211 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 GATA5Q9BWX5 397 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-227ENST00000485102 LAT2Q9GZY6 243 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 MANSC1Q9H8J5 431 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 EMC3Q9P0I2 261 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 FAF1Q9UNN5 650 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-227ENST00000485102 RAP2CQ9Y3L5 183 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 SLC25A15Q9Y619 301 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 KCNE3Q9Y6H6 103 aa11.47□□□□□ -0.57
HDAC6-227ENST00000485102 NPIPA5A0A0B4J1W7 369 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 DUXAA6NLW8 204 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 NPIPA7E9PJI5 369 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 DNPH1O43598 174 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 GUSBP08236 651 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 CSF3P09919 207 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 LINC00032P0C843 101 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 NPIPA8P0DM63 369 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 LAMP1P11279 417 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 UBL4AP11441 157 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 CD40P25942 277 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 FKBP2P26885 142 aaKnown RBP11.46□□□□□ -0.57
HDAC6-227ENST00000485102 MAPK1P28482 360 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 HPCAL1P37235 193 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 SLC1A6P48664 564 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 DIO1P49895 249 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 SLC16A1P53985 500 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 CSNK2A1P68400 391 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-227ENST00000485102 LSM12Q3MHD2 195 aaKnown RBP11.46□□□□□ -0.57
HDAC6-227ENST00000485102 UGT3A2Q3SY77 523 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 TIGD2Q4W5G0 525 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 CYB5R2Q6BCY4 276 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 ABLIM2Q6H8Q1 611 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 OR7E24Q6IFN5 339 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 KLHL17Q6TDP4 642 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 ZNF100Q8IYN0 542 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 FBXL14Q8N1E6 418 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 ATP6V1C2Q8NEY4 427 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 SLC25A43Q8WUT9 341 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms