RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 TUBA1AQ71U36 451 aa10.11□□□□□ -0.79
USP11-208ENST00000480104 MARS2Q96GW9 593 aaKnown RBP10.11□□□□□ -0.79
USP11-208ENST00000480104 CALR3Q96L12 384 aaKnown RBP10.11□□□□□ -0.79
USP11-208ENST00000480104 SERPINI1Q99574 410 aa10.11□□□□□ -0.79
USP11-208ENST00000480104 OCSTAMPQ9BR26 566 aa10.11□□□□□ -0.79
USP11-208ENST00000480104 DERL2Q9GZP9 239 aa10.11□□□□□ -0.79
USP11-208ENST00000480104 MS4A5Q9H3V2 200 aa10.11□□□□□ -0.79
USP11-208ENST00000480104 HHATLQ9HCP6 504 aa10.11□□□□□ -0.79
USP11-208ENST00000480104 OBP2BQ9NPH6 170 aa10.11□□□□□ -0.79
USP11-208ENST00000480104 SENP1Q9P0U3 644 aa10.11□□□□□ -0.79
USP11-208ENST00000480104 OPTCQ9UBM4 332 aa10.11□□□□□ -0.79
USP11-208ENST00000480104 SEC14L4Q9UDX3 406 aa10.11□□□□□ -0.79
USP11-208ENST00000480104 LEF1Q9UJU2 399 aaPredicted RBP10.11□□□□□ -0.79
USP11-208ENST00000480104 STARD9Q9P2P6 4700 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 GUCY1B2O75343 617 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 S100BP04271 92 aaPredicted RBP10.1□□□□□ -0.79
USP11-208ENST00000480104 CELA3BP08861 270 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 RAD52P43351 418 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 KCNJ1P48048 391 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 PDK3Q15120 406 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 TRADDQ15628 312 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 CD226Q15762 336 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 TOMM34Q15785 309 aaPredicted RBP10.1□□□□□ -0.79
USP11-208ENST00000480104 DEFB112Q30KQ8 113 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 GLE1Q53GS7 698 aaKnown RBP10.1□□□□□ -0.79
USP11-208ENST00000480104 DEFB121Q5J5C9 76 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 TSPO2Q5TGU0 170 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 PAGE2Q7Z2X7 111 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 COMMD6Q7Z4G1 85 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 PARP8Q8N3A8 854 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 WDR20Q8TBZ3 569 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 ZDHHC16Q969W1 377 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 TM4SF18Q96CE8 201 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 LMBRD1Q9NUN5 540 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 CRNNQ9UBG3 495 aaPredicted RBP10.1□□□□□ -0.79
USP11-208ENST00000480104 CMAHPQ9Y471 501 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 WIPI2Q9Y4P8 454 aa10.1□□□□□ -0.79
USP11-208ENST00000480104 IGHV2OR16-5A0A0B4J2B6 119 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 FAM95CA0A1B0GW59 222 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 CXorf49A8MYA2 514 aaPredicted RBP10.09□□□□□ -0.79
USP11-208ENST00000480104 GPR171O14626 319 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 OIP5O43482 229 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 NUDT14O95848 222 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 NGFRP08138 427 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 MYZAPP0CAP1 466 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 CD1DP15813 335 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 DIO1P49895 249 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 C3orf36Q3SXR2 165 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 TBRG1Q3YBR2 411 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 KLHL22Q53GT1 634 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 SEL1L2Q5TEA6 688 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 LIPJQ5W064 366 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 KRT80Q6KB66 452 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 DRICH1Q6PGQ1 229 aaPredicted RBP10.09□□□□□ -0.79
USP11-208ENST00000480104 SAMD14Q8IZD0 417 aaPredicted RBP10.09□□□□□ -0.79
USP11-208ENST00000480104 TEX9Q8N6V9 391 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 ZNF524Q96C55 264 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 SLC47A1Q96FL8 570 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 CERS2Q96G23 380 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 ARL5BQ96KC2 179 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 BBS4Q96RK4 519 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 GAL3ST1Q99999 423 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 B9D2Q9BPU9 175 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 SYT3Q9BQG1 590 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 MRI1Q9BV20 369 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 FAIM2Q9BWQ8 316 aa10.09□□□□□ -0.79
USP11-208ENST00000480104 PPANQ9NQ55 473 aaKnown RBP10.09□□□□□ -0.79
USP11-208ENST00000480104 GPC6Q9Y625 555 aaPredicted RBP10.09□□□□□ -0.79
USP11-208ENST00000480104 TRIM49D1C9J1S8 452 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 TPM1P09493 284 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 GABRA3P34903 492 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 EVX1P49640 407 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 ZNF117Q03924 483 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 DAG1Q14118 895 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 SLC29A2Q14542 456 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 SPA17Q15506 151 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 ZNF620Q6ZNG0 422 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 ZAR1Q86SH2 424 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 MTDHQ86UE4 582 aaKnown RBP10.08□□□□□ -0.8
USP11-208ENST00000480104 MISPQ8IVT2 679 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 FAM9CQ8IZT9 166 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 OR52E2Q8NGJ4 325 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 UBTD2Q8WUN7 234 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 PIK3R3Q92569 461 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 EXOSC8Q96B26 276 aaKnown RBP10.08□□□□□ -0.8
USP11-208ENST00000480104 TRIM44Q96DX7 344 aaPredicted RBP10.08□□□□□ -0.8
USP11-208ENST00000480104 RBBP8Q99708 897 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 NOX3Q9HBY0 568 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 SIRT3Q9NTG7 399 aaPredicted RBP10.08□□□□□ -0.8
USP11-208ENST00000480104 MYEF2Q9P2K5 600 aaKnown RBP10.08□□□□□ -0.8
USP11-208ENST00000480104 PSAT1Q9Y617 370 aa10.08□□□□□ -0.8
USP11-208ENST00000480104 NR5A2O00482 541 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 XPNPEP2O43895 674 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 BANF1O75531 89 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 FOXH1O75593 365 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 KCNH1O95259 989 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 PSMG1O95456 288 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 PLATP00750 562 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 NAT2P11245 290 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 ZNF12P17014 697 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms