RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PRICKLE4Q2TBC4 344 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 C18orf21Q32NC0 220 aaPredicted RBP3.13□□□□□ -1.91
XRN1-209ENST00000472625 CHRFAM7AQ494W8 412 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 ZNF628Q5EBL2 1059 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 DCST1Q5T197 706 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 LGSNQ5TDP6 509 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 ACSM2BQ68CK6 577 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 NXNQ6DKJ4 435 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 ADAM5Q6NVV9 412 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 SH2D5Q6ZV89 423 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 IKBIPQ70UQ0 350 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 COMMD6Q7Z4G1 85 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 GOLGA7Q7Z5G4 137 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 GLCCI1Q86VQ1 547 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 TDRPQ86YL5 185 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 UBQLNLQ8IYU4 475 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 SLC35F6Q8N357 371 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 METTL4Q8N3J2 472 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 MMGT1Q8N4V1 131 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 WDSUB1Q8N9V3 476 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 CEP70Q8NHQ1 597 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 WDR20Q8TBZ3 569 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 ACTRT2Q8TDY3 377 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 SELENOMQ8WWX9 145 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 TMBIM1Q969X1 311 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 CPNE4Q96A23 557 aaPredicted RBP3.13□□□□□ -1.91
XRN1-209ENST00000472625 STARD4Q96DR4 205 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 MTBPQ96DY7 904 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 METTL2AQ96IZ6 378 aaKnown RBP3.13□□□□□ -1.91
XRN1-209ENST00000472625 ADAD1Q96M93 576 aaKnown RBP3.13□□□□□ -1.91
XRN1-209ENST00000472625 NAPGQ99747 312 aaPredicted RBP3.13□□□□□ -1.91
XRN1-209ENST00000472625 MRPL57Q9BQC6 102 aaKnown RBP3.13□□□□□ -1.91
XRN1-209ENST00000472625 ERP44Q9BS26 406 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 DUSP26Q9BV47 211 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 PINK1Q9BXM7 581 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 ZNF717Q9BY31 904 aaPredicted RBP3.13□□□□□ -1.91
XRN1-209ENST00000472625 POTEKPQ9BYX7 375 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 TRIM31Q9BZY9 425 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 KLK15Q9H2R5 256 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 NOL11Q9H8H0 719 aaKnown RBP3.13□□□□□ -1.91
XRN1-209ENST00000472625 CAB39LQ9H9S4 337 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 PLAC1Q9HBJ0 212 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 MOV10Q9HCE1 1003 aaKnown RBP3.13□□□□□ -1.91
XRN1-209ENST00000472625 ZBTB26Q9HCK0 441 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 MIEF1Q9NQG6 463 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 DDX18Q9NVP1 670 aaKnown RBP3.13□□□□□ -1.91
XRN1-209ENST00000472625 ASB6Q9NWX5 421 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 TMEM160Q9NX00 188 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 KLHL28Q9NXS3 571 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 MAT2BQ9NZL9 334 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 C6orf203Q9P0P8 240 aaPredicted RBP3.13□□□□□ -1.91
XRN1-209ENST00000472625 VPS29Q9UBQ0 182 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 FBXO9Q9UK97 447 aaPredicted RBP3.13□□□□□ -1.91
XRN1-209ENST00000472625 GRID1Q9ULK0 1009 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 SLC12A4Q9UP95 1085 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 HCFC1P51610 2035 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 ACANP16112 2415 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 ATRQ13535 2644 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 SVEP1Q4LDE5 3571 aa3.13□□□□□ -1.91
XRN1-209ENST00000472625 CSPG4Q6UVK1 2322 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 A0A096LPK6 155 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 IGLV3-32A0A0A0MS00 114 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 A0A1W2PP18 115 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 TRIM64A6NGJ6 449 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 TRIM64BA6NI03 449 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 LINC00473A8K010 186 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 H3BNH8 94 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 M0QYG6 137 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 PGRMC2O15173 223 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 SEC14L5O43304 696 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 CD5LO43866 347 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 PCDH7O60245 1069 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 RBMXL2O75526 392 aaKnown RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 PRKRAO75569 313 aaKnown RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 TGM6O95932 706 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 C2P06681 752 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 ENO1P06733 434 aaKnown RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 NGFRP08138 427 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 KRT16P08779 473 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 CT62P0C5K7 136 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 FAM157CP0CG43 387 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 CT45A8P0DMV1 189 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 CT45A9P0DMV2 189 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 SLC25A16P16260 332 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 IL11P20809 199 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 PCMT1P22061 227 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 PAX7P23759 505 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 HMOX2P30519 316 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 SSTR1P30872 391 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 CCKARP32238 428 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 FEN1P39748 380 aaKnown RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 SLCO1A2P46721 670 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 EMDP50402 254 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 WNT3P56703 355 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 GNG11P61952 73 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 SIRPAP78324 504 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 MRPS35P82673 323 aaKnown RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 CKAP4Q07065 602 aaKnown RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 FAM27E3Q08E93 113 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms