RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 LIX1LQ8IVB5 337 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 SLC15A3Q8IY34 581 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 SMYD1Q8NB12 490 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 CCDC197Q8NCU1 140 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 NAXEQ8NCW5 288 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 OR10D3Q8NH80 312 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 CA5BP1Q8WTZ4 195 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 ASB5Q8WWX0 329 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 FIG4Q92562 907 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 OSTF1Q92882 214 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 WNT2BQ93097 391 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 REXO5Q96IC2 774 aaKnown RBP11.13□□□□□ -0.63
CHPF2-202ENST00000465601 ADGRG7Q96K78 797 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 KLHL15Q96M94 604 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 UCN2Q96RP3 112 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 HOPXQ9BPY8 73 aaPredicted RBP11.13□□□□□ -0.63
CHPF2-202ENST00000465601 UCK2Q9BZX2 261 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 CTPS2Q9NRF8 586 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 SERINC1Q9NRX5 453 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 GMPR2Q9P2T1 348 aaKnown RBP11.13□□□□□ -0.63
CHPF2-202ENST00000465601 CLCF1Q9UBD9 225 aa11.13□□□□□ -0.63
CHPF2-202ENST00000465601 ALPK2Q86TB3 2170 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 MBD3L4A6NDZ8 208 aaPredicted RBP11.12□□□□□ -0.63
CHPF2-202ENST00000465601 MBD3L3A6NE82 208 aaPredicted RBP11.12□□□□□ -0.63
CHPF2-202ENST00000465601 PRORSD1PA6NEY8 169 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 MBD3L5A6NJ08 208 aaPredicted RBP11.12□□□□□ -0.63
CHPF2-202ENST00000465601 SLC22A20A6NK97 555 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 FAM90A27PA6NNH2 459 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 HSPB2A8KAH6 182 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 FAAHO00519 579 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 CXCL13O43927 109 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 CLDN14O95500 239 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 UQCRBP14927 111 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 CHRNB4P30926 498 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 APOBEC1P41238 236 aaKnown RBP11.12□□□□□ -0.63
CHPF2-202ENST00000465601 SLC1A3P43003 542 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 SLC7A2P52569 658 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 AGFG1P52594 562 aaKnown RBP11.12□□□□□ -0.63
CHPF2-202ENST00000465601 ZNF136P52737 540 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 DLX5P56178 289 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 CARD18P57730 90 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 PSME3P61289 254 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 COPZ1P61923 177 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 SELENBP1Q13228 472 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 PON3Q15166 354 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 HSPB2Q16082 182 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 PDSS1Q5T2R2 415 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 INTS11Q5TA45 600 aaKnown RBP11.12□□□□□ -0.63
CHPF2-202ENST00000465601 HBMQ6B0K9 141 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 PPP4R4Q6NUP7 873 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 C8orf82Q6P1X6 216 aaPredicted RBP11.12□□□□□ -0.63
CHPF2-202ENST00000465601 MAMDC2Q7Z304 686 aaPredicted RBP11.12□□□□□ -0.63
CHPF2-202ENST00000465601 GRINAQ7Z429 371 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 ARPINQ7Z6K5 226 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 PATL1Q86TB9 770 aaKnown RBP11.12□□□□□ -0.63
CHPF2-202ENST00000465601 ADGRG3Q86Y34 549 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 SLC30A8Q8IWU4 369 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 CADM2Q8N3J6 435 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 FITM2Q8N6M3 262 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 OR2V1Q8NHB1 315 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 LILRB4Q8NHJ6 448 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 MBD3L2Q8NHZ7 208 aaPredicted RBP11.12□□□□□ -0.63
CHPF2-202ENST00000465601 FNDC9Q8TBE3 224 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 PRR14Q9BWN1 585 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 TAGLN3Q9UI15 199 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 OSGIN1Q9UJX0 560 aa11.12□□□□□ -0.63
CHPF2-202ENST00000465601 TMED7-TICAM2A0A0A6YYA0 188 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 A0A1W2PNR3 127 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 GJE1A6NN92 205 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 FAM220BPB1ANY3 271 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 NME4O00746 187 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 RCBTB2O95199 551 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 TMIGD3P0DMS9 266 aaPredicted RBP11.11□□□□□ -0.63
CHPF2-202ENST00000465601 TFPIP10646 304 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 COL8A1P27658 744 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 HTR1EP28566 365 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 TACR3P29371 465 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 LIPEQ05469 1076 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 FOXF2Q12947 444 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 DUSP7Q16829 419 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 FAM91A1Q658Y4 838 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 HIST2H2BCQ6DN03 193 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 WBP2NLQ6ICG8 309 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 C3orf33Q6P1S2 294 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 ERICH5Q6P6B1 374 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 CCDC80Q76M96 950 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 MICU2Q8IYU8 434 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 BHLHE22Q8NFJ8 381 aaPredicted RBP11.11□□□□□ -0.63
CHPF2-202ENST00000465601 OR2T12Q8NG77 320 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 GPR32P1Q8NGA4 272 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 BCAS4Q8TDM0 211 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 SLC26A7Q8TE54 656 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 TAMM41Q96BW9 452 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 INTS12Q96CB8 462 aaKnown RBP11.11□□□□□ -0.63
CHPF2-202ENST00000465601 DNAJA3Q96EY1 480 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 TM9SF2Q99805 663 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 WFDC6Q9BQY6 131 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 PRRG4Q9BZD6 226 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 ADAM19Q9H013 955 aa11.11□□□□□ -0.63
CHPF2-202ENST00000465601 COQ10BQ9H8M1 238 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms