RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 RNFT1Q5M7Z0 435 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 ZNF770Q6IQ21 691 aaPredicted RBP13□□□□□ -0.33
COL6A1-202ENST00000463060 PODNL1Q6PEZ8 512 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 GRINAQ7Z429 371 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 CADM2Q8N3J6 435 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 OR5K1Q8NHB7 308 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 ZNF563Q8TA94 476 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 TMEM234Q8WY98 164 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 MRGPRX4Q96LA9 322 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 JSRP1Q96MG2 331 aaPredicted RBP13□□□□□ -0.33
COL6A1-202ENST00000463060 TTTY12Q9BZ98 90 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 OR2B2Q9GZK3 357 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 REEP1Q9H902 201 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 QPCTLQ9NXS2 382 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 GNGT2O14610 69 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 NPIPB7O75200 414 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 HPNP05981 417 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 PNMTP11086 282 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 FPR1P21462 350 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 IFNA8P32881 189 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 HTR3AP46098 478 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 B3GALT5-AS1P59052 145 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 EXOC3L2Q2M3D2 409 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 PLEKHN1Q494U1 663 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-202ENST00000463060 SHQ1Q6PI26 577 aaKnown RBP12.99□□□□□ -0.33
COL6A1-202ENST00000463060 TBPL2Q6SJ96 375 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 ASB18Q6ZVZ8 466 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 LSRQ86X29 649 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-202ENST00000463060 EPHX4Q8IUS5 362 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 GTPBP8Q8N3Z3 284 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-202ENST00000463060 TMEM251Q8N6I4 163 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 EXD3Q8N9H8 876 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 OR52J3Q8NH60 311 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 NRG4Q8WWG1 115 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 ACOT11Q8WXI4 607 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-202ENST00000463060 ZBTB8AQ96BR9 441 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 ALPK1Q96QP1 1244 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 PSD2Q9BQI7 771 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 ZNF703Q9H7S9 590 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-202ENST00000463060 RPS6KB2Q9UBS0 482 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 RALYQ9UKM9 306 aaKnown RBP12.99□□□□□ -0.33
COL6A1-202ENST00000463060 OAZ3Q9UMX2 235 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 LHX6Q9UPM6 363 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 B3GNT3Q9Y2A9 372 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 SAMHD1Q9Y3Z3 626 aaKnown RBP12.99□□□□□ -0.33
COL6A1-202ENST00000463060 MAGED1Q9Y5V3 778 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-202ENST00000463060 U3KQV3 271 aa12.99□□□□□ -0.33
COL6A1-202ENST00000463060 PKD1L2Q7Z442 2459 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 IGKV1D-42A0A075B6H8 117 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 SHISA8B8ZZ34 492 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 RFC3P40938 356 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 APOBEC1P41238 236 aaKnown RBP12.98□□□□□ -0.33
COL6A1-202ENST00000463060 EIF1P41567 113 aaKnown RBP12.98□□□□□ -0.33
COL6A1-202ENST00000463060 RBM34P42696 430 aaKnown RBP12.98□□□□□ -0.33
COL6A1-202ENST00000463060 ZNF41P51814 821 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-202ENST00000463060 POLR2HP52434 150 aaKnown RBP12.98□□□□□ -0.33
COL6A1-202ENST00000463060 EGR4Q05215 589 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 FOXF1Q12946 379 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 MICAQ29983 383 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 OGFRL1Q5TC84 451 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-202ENST00000463060 HS3ST5Q8IZT8 346 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 SVOPLQ8N434 492 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 FAM83FQ8NEG4 500 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-202ENST00000463060 C9orf43Q8TAL5 461 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-202ENST00000463060 TMEM255BQ8WV15 326 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 HS6ST2Q96MM7 605 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 UBL7Q96S82 380 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-202ENST00000463060 TMEM43Q9BTV4 400 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 RASSF4Q9H2L5 321 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 ZDHHC11Q9H8X9 412 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 MEPEQ9NQ76 525 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-202ENST00000463060 VDAC3Q9Y277 283 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 FREM3P0C091 2139 aa12.98□□□□□ -0.33
COL6A1-202ENST00000463060 ITPR1Q14643 2758 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 TMED7-TICAM2A0A0A6YYA0 188 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 ARRDC5A6NEK1 342 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 IGF2P01344 180 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 CELA3AP09093 270 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 ZNF17P17021 662 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 ZNF26P17031 533 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-202ENST00000463060 HK1P19367 917 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 IL11P20809 199 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 PRKACGP22612 351 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 MAP2K6P52564 334 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 UGT2B15P54855 530 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 PPIAP62937 165 aaKnown RBP12.97□□□□□ -0.33
COL6A1-202ENST00000463060 MERTKQ12866 999 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 LAPTM4AQ15012 233 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 DCST1Q5T197 706 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 SLC6A19Q695T7 634 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 C19orf48Q6RUI8 117 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 MBOAT2Q6ZWT7 520 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 HIPK1Q86Z02 1210 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 RNF113BQ8IZP6 322 aaKnown RBP12.97□□□□□ -0.33
COL6A1-202ENST00000463060 LINC00471Q8N535 108 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 OR4K5Q8NGD3 323 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 TMEM239Q8WW34 195 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 TAAR6Q96RI8 345 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 SLC29A1Q99808 456 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 MFRPQ9BY79 579 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms