RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 SLC6A8P48029 635 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 CLK3P49761 638 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 PPP2R2BQ00005 443 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 LRRC74AQ0VAA2 488 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 FGFBP1Q14512 234 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 SQLEQ14534 574 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 SYPL1Q16563 259 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 GLYR1Q49A26 553 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 ANKRD34AQ69YU3 496 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 SLC2A7Q6PXP3 512 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 STAC2Q6ZMT1 411 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZNF704Q6ZNC4 412 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 PLEKHM3Q6ZWE6 761 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 FAM214BQ7L5A3 538 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 MTERF4Q7Z6M4 381 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 LSRQ86X29 649 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 MISPQ8IVT2 679 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 C10orf111Q8N326 155 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 GTPBP8Q8N3Z3 284 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 MEIOBQ8N635 442 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 ANKFN1Q8N957 763 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 FAM71CQ8NEG0 241 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 B4GALNT2Q8NHY0 566 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 PNPT1Q8TCS8 783 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 PHOSPHO1Q8TCT1 267 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 ROPN1LQ96C74 230 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 DTNBP1Q96EV8 351 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 AURKBQ96GD4 344 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 ADGRG7Q96K78 797 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 SLC39A3Q9BRY0 314 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 REPIN1Q9BWE0 567 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 SAP130Q9H0E3 1048 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 CCDC134Q9H6E4 229 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 NPHS2Q9NP85 383 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 MED17Q9NVC6 651 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 SLC25A37Q9NYZ2 338 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 DCTN4Q9UJW0 460 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 MKLN1Q9UL63 735 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 ICAM5Q9UMF0 924 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 PROCRQ9UNN8 238 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 DTNAQ9Y4J8 743 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 HEATR1Q9H583 2144 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 ARFGEF3Q5TH69 2177 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 DSPPQ9NZW4 1301 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 A0A087WZY1 265 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 A0A096LPI6 279 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 SERINC4A6NH21 518 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 LINC01387J3KSC0 135 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 ETV2O00321 342 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 NR5A2O00482 541 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 HS3ST1O14792 307 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 ADAM11O75078 769 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 SS18L1O75177 396 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 CRLF1O75462 422 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 STX11O75558 287 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 H6PDO95479 791 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 NTN1O95631 604 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 AGR2O95994 175 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 ETFAP13804 333 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 IL11P20809 199 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 SHC1P29353 583 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 PGM1P36871 562 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 KCNJ5P48544 419 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 P2RX1P51575 399 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 NR1H2P55055 460 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 SUMO3P55854 103 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 STX1BP61266 288 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 CHRNEQ04844 493 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 FOXF1Q12946 379 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 SKP2Q13309 424 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 TNK1Q13470 666 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 GPR68Q15743 365 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 TOMM34Q15785 309 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 CTU2Q2VPK5 515 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 BEX5Q5H9J7 111 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 PAGE3Q5JUK9 113 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 LRIF1Q5T3J3 769 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZNF621Q6ZSS3 439 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 CHMP1BQ7LBR1 199 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 C16orf62Q7Z3J2 963 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 HMGN2P46Q86SG4 172 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZNF619Q8N2I2 560 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 TRIML2Q8N7C3 387 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZNF614Q8N883 585 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZNF527Q8NB42 609 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 OR6K3Q8NGY3 331 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 GPR119Q8TDV5 335 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 XAGE5Q8WWM1 108 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZG16BQ96DA0 208 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 SPDL1Q96EA4 605 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 ITCHQ96J02 903 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 RNF145Q96MT1 663 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 TMEM120AQ9BXJ8 343 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 KLHL4Q9C0H6 718 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 HOXD1Q9GZZ0 328 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 QRSL1Q9H0R6 528 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 PTGES2Q9H7Z7 377 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 TPT1P8Q9HAU6 139 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 POLE3Q9NRF9 147 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 EXD2Q9NVH0 621 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms