RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 DGCR14Q96DF8 476 aaKnown RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 MTERF3Q96E29 417 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 TMEM19Q96HH6 336 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 CELF6Q96J87 481 aaKnown RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 RNF170Q96K19 258 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 JSRP1Q96MG2 331 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR5B2Q96R09 309 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 APOL2Q9BQE5 337 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 C12orf4Q9NQ89 552 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 THSD1Q9NS62 852 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 GKN1Q9NS71 199 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 C19orf12Q9NSK7 152 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 C2orf42Q9NWW7 574 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 NDE1Q9NXR1 346 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 USE1Q9NZ43 259 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 RSPH14Q9UHP6 348 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 KIF25Q9UIL4 384 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 ANAPC7Q9UJX3 599 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 PADI3Q9ULW8 664 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 CLEC4EQ9ULY5 219 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF175Q9Y473 711 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 PEX16Q9Y5Y5 336 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 ETV7Q9Y603 341 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 SMIM35A0A1B0GVV1 85 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 WDR27A2RRH5 827 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 SMIM23A6NLE4 172 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 C2CD4BA6NLJ0 364 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 YJEFN3A6XGL0 299 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 B4DGG1 531 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 H3BMH7 237 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 CCSO14618 274 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 TFECO14948 347 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 EFNA2O43921 213 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 UGDHO60701 494 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 SLC19A2O60779 497 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 RAMP3O60896 148 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 AP2A2O94973 939 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 FGGP02679 453 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 KRT16P08779 473 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 HOXB2P14652 356 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 HLA-GP17693 338 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 NPR2P20594 1047 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 M6PRP20645 277 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 PCSK6P29122 969 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 CSKP41240 450 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 MAGEA5P43359 124 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 RFX3P48380 749 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 RGS6P49758 472 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 CTSCP53634 463 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 PKNOX1P55347 436 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 TMEM50BP56557 158 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 SPCS3P61009 180 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 KLRC3Q07444 240 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 C2orf54Q08AI8 447 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 SCRN3Q0VDG4 424 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 MED21Q13503 144 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 TFDP1Q14186 410 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR1C1Q15619 314 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 TSC22D1Q15714 1073 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNF74Q16587 644 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 PPP1R3AQ16821 1122 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 VPS26BQ4G0F5 336 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 RAB6CQ53S08 254 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 PAN3Q58A45 887 aaKnown RBP3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 TEDDM1Q5T9Z0 273 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 FRG2Q64ET8 278 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 REEP3Q6NUK4 255 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 DPY19L2P2Q6ZN68 376 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 GCNT7Q6ZNI0 430 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNF621Q6ZSS3 439 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 Q7L0L9 218 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNF367Q7RTV3 350 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 SLC16A14Q7RTX9 510 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 PRUNE1Q86TP1 453 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 TMEM25Q86YD3 366 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 APRG1Q8IVJ8 170 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 HS3ST5Q8IZT8 346 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 SPAG16Q8N0X2 631 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 CYP4Z2PQ8N1L4 340 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 TRAM1L1Q8N609 369 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 NANOGP1Q8N7R0 232 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 TMEM99Q8N816 258 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 Q8N9G6 341 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 NPEPL1Q8NDH3 523 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR52I1Q8NGK6 324 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR6Q1Q8NGQ2 317 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR4Q3Q8NH05 313 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 MRAPQ8TCY5 172 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 SLC38A5Q8WUX1 472 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 TAAR8Q969N4 342 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 UPRTQ96BW1 309 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 P2RY11Q96G91 374 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 TIMD4Q96H15 378 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 UHRF2Q96PU4 802 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 KLHDC3Q9BQ90 382 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 THAP7Q9BT49 309 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 RSG1Q9BU20 258 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNF426Q9BUY5 554 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 ALG8Q9BVK2 526 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 PANK2Q9BZ23 570 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms