RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 A0A1W2PNV4 684 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 RPL37AP8A6NKH3 93 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 SUPT3HB4E1H0 165 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 TEX46H3BTG2 121 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 HAS3O00219 553 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 POLR3GO15318 223 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 RGS16O15492 202 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 LATO43561 262 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 KRT6AP02538 564 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 CRYGBP07316 175 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 BCKDHAP12694 445 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 H2AFXP16104 143 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 SDC1P18827 310 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 IGFBP5P24593 272 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 SHC1P29353 583 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 PPP2R1BP30154 601 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 ATP5C1P36542 298 aaKnown RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 ETV5P41161 510 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 SLC1A4P43007 532 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 OR1D4P47884 311 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 CLDN8P56748 225 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 RIPK4P57078 832 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 LMO4P61968 165 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 RPS15P62841 145 aaKnown RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 SRPXP78539 464 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 IL9RQ01113 521 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 OTUD4Q01804 1114 aaKnown RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 CD300CQ08708 224 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 ZNF154Q13106 437 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 DNAJC3Q13217 504 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 ILKQ13418 452 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 IL18R1Q13478 541 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 HIKESHIQ53FT3 197 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 HSP90B2PQ58FF3 399 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 DMRTC1Q5HYR2 192 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 AGBL2Q5U5Z8 902 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 ENPP6Q6UWR7 440 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 VITQ6UXI7 678 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 APTXQ7Z2E3 356 aaKnown RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 GPR137CQ8N3F9 429 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 COMMD1Q8N668 190 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 Q8N9G6 341 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 Q8NBF4 154 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 FAM83FQ8NEG4 500 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 OR4Q3Q8NH05 313 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 OR8K3Q8NH51 312 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 FAM81AQ8TBF8 368 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 KIAA1143Q96AT1 154 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 SLC45A3Q96JT2 553 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 TBX15Q96SF7 602 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 OCR1Q9BZK8 76 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 NEUROG2Q9H2A3 272 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 NARFLQ9H6Q4 476 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 TMEM185BQ9H7F4 350 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 CYP3A43Q9HB55 503 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 ZNHIT6Q9NWK9 470 aaKnown RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 ELOVL2Q9NXB9 296 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 PDP1Q9P0J1 537 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 GCNT4Q9P109 453 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 KLK13Q9UKR3 277 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 ANGPTL2Q9UKU9 493 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 PACSIN2Q9UNF0 486 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 IGHV3-16A0A0C4DH30 117 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 TRBV7-9A0A0J9YWB2 115 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 A0A1B0GUS0 222 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 TRABD2BA6NFA1 517 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 PP2D1A8MPX8 630 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 FOXI3A8MTJ6 420 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 EPM2AB3EWF7 344 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 NPIPA7E9PJI5 369 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 DLGAP1O14490 977 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 TRAFD1O14545 582 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 NVLO15381 856 aaKnown RBP2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 RS1O15537 224 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 RAMP1O60894 148 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 N4BP1O75113 896 aaKnown RBP2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 ATP5LO75964 103 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 SCGNO76038 276 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 VENTXO95231 258 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 LGI1O95970 557 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 CSTAP01040 98 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 IGHG4P01861 327 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 NPIPA8P0DM63 369 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 TROVE2P10155 538 aaKnown RBP eCLIP2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 GATA1P15976 413 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 POLR2EP19388 210 aaKnown RBP2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 CHMLP26374 656 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 GCAP28676 217 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 CD80P33681 288 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 ACVR1BP36896 505 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 HSD17B2P37059 387 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 NUP62P37198 522 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 ANP32AP39687 249 aaKnown RBP2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 RPS5P46782 204 aaKnown RBP2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 GNPDA1P46926 289 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 CSNK1EP49674 416 aaKnown RBP2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 PRELPP51888 382 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 ARHGDIAP52565 204 aa2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 CRYBB1P53674 252 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P9-201ENST00000429856 PLP1P60201 277 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms