RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 KLHL9Q9P2J3 617 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 CHRNA9Q9UGM1 479 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 VDAC3Q9Y277 283 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 NDUFAF1Q9Y375 327 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 ANKRD17O75179 2603 aaKnown RBP8.18□□□□□ -1.1
SMC1A-203ENST00000428014 A0A0J9YW62 118 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 NKX2-6A6NCS4 301 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 CFAP73A6NFT4 308 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 FAM90A27PA6NNH2 459 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 EIF1AYO14602 144 aaKnown RBP8.18□□□□□ -1.1
SMC1A-203ENST00000428014 GPR171O14626 319 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 FMO6PO60774 539 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 NUDT14O95848 222 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 C8BP07358 591 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 VIMP08670 466 aaKnown RBP8.18□□□□□ -1.1
SMC1A-203ENST00000428014 PSMB1P20618 241 aaKnown RBP8.18□□□□□ -1.1
SMC1A-203ENST00000428014 CD79BP40259 229 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 CRATP43155 626 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 KIR2DL3P43628 341 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 H3F3AP84243 136 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 PLAURQ03405 335 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 SRYQ05066 204 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 EPS8Q12929 822 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 FOXF1Q12946 379 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 P2RY6Q15077 328 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 SYT14P1Q58G82 188 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 HBMQ6B0K9 141 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 REEP3Q6NUK4 255 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 DHRS4L2Q6PKH6 230 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 DLEU7Q6UYE1 221 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 TMPPEQ6ZT21 453 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 PLEKHM3Q6ZWE6 761 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 NET1Q7Z628 596 aaPredicted RBP8.18□□□□□ -1.1
SMC1A-203ENST00000428014 SERPINA11Q86U17 422 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 STK32CQ86UX6 486 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 KRT73Q86Y46 540 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 PLPP7Q8NBV4 271 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 OR6S1Q8NH40 331 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 RASSF5Q8WWW0 418 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 OSTF1Q92882 214 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 RAB8BQ92930 207 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 VPS33AQ96AX1 596 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 INTS12Q96CB8 462 aaKnown RBP8.18□□□□□ -1.1
SMC1A-203ENST00000428014 ZHX1-C8orf76Q96EF9 292 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 BOD1Q96IK1 185 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 ANKRD27Q96NW4 1050 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF559Q9BR84 538 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 THUMPD3Q9BV44 507 aaKnown RBP8.18□□□□□ -1.1
SMC1A-203ENST00000428014 RBM24Q9BX46 236 aaKnown RBP8.18□□□□□ -1.1
SMC1A-203ENST00000428014 UCK2Q9BZX2 261 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 COQ10BQ9H8M1 238 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 SLC25A37Q9NYZ2 338 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 KLHL14Q9P2G3 628 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 KLHL13Q9P2N7 655 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 NDRG3Q9UGV2 375 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 TACC2O95359 2948 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 FBN2P35556 2912 aa8.18□□□□□ -1.1
SMC1A-203ENST00000428014 TUBAL3A6NHL2 446 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 ENO4A6NNW6 628 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 EFNA2O43921 213 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 CYTIPO60759 359 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 SERPINB7O75635 380 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 CTAG2O75638 210 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 PRKD3O94806 890 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 VAMP5O95183 116 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 PGM3O95394 542 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 SNRPB2P08579 225 aaKnown RBP8.17□□□□□ -1.1
SMC1A-203ENST00000428014 UBTFL6P0CB48 400 aaPredicted RBP8.17□□□□□ -1.1
SMC1A-203ENST00000428014 SLC7A1P30825 629 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 EIF1AXP47813 144 aaKnown RBP8.17□□□□□ -1.1
SMC1A-203ENST00000428014 POLR2HP52434 150 aaKnown RBP8.17□□□□□ -1.1
SMC1A-203ENST00000428014 PCBP3P57721 371 aaKnown RBP8.17□□□□□ -1.1
SMC1A-203ENST00000428014 TLE4Q04727 773 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 LAPTM4AQ15012 233 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 SYPL1Q16563 259 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 AGKQ53H12 422 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 RUNDC3AQ59EK9 446 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 COX20Q5RI15 118 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 MRPL2Q5T653 305 aaKnown RBP8.17□□□□□ -1.1
SMC1A-203ENST00000428014 INTS11Q5TA45 600 aaKnown RBP8.17□□□□□ -1.1
SMC1A-203ENST00000428014 ABLIM2Q6H8Q1 611 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 WBP2NLQ6ICG8 309 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 GALNT10Q86SR1 603 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 MTDHQ86UE4 582 aaKnown RBP8.17□□□□□ -1.1
SMC1A-203ENST00000428014 MSRB3Q8IXL7 192 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 ANKFN1Q8N957 763 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 OR8J3Q8NGG0 315 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 OR52P1PQ8NH57 321 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 FIG4Q92562 907 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 DDIT4LQ96D03 193 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 ZG16BQ96DA0 208 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 OTUB1Q96FW1 271 aaPredicted RBP8.17□□□□□ -1.1
SMC1A-203ENST00000428014 TMEM19Q96HH6 336 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 SH3YL1Q96HL8 342 aaPredicted RBP8.17□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF845Q96IR2 970 aaPredicted RBP8.17□□□□□ -1.1
SMC1A-203ENST00000428014 LURAP1Q96LR2 239 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF317Q96PQ6 595 aaPredicted RBP8.17□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF607Q96SK3 696 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 CGREF1Q99674 301 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 SF3B5Q9BWJ5 86 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms