RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 VRK2Q86Y07 508 aa15.9■□□□□ 0.14
SBDSP1-202ENST00000423945 CMIPQ8IY22 773 aa15.9■□□□□ 0.14
SBDSP1-202ENST00000423945 ARFGAP2Q8N6H7 521 aa15.9■□□□□ 0.14
SBDSP1-202ENST00000423945 STON2Q8WXE9 905 aa15.9■□□□□ 0.14
SBDSP1-202ENST00000423945 TMEM234Q8WY98 164 aa15.9■□□□□ 0.14
SBDSP1-202ENST00000423945 PMM1Q92871 262 aa15.9■□□□□ 0.14
SBDSP1-202ENST00000423945 TMEM19Q96HH6 336 aa15.9■□□□□ 0.14
SBDSP1-202ENST00000423945 GLRX2Q9NS18 164 aa15.9■□□□□ 0.14
SBDSP1-202ENST00000423945 P2RX2Q9UBL9 471 aa15.9■□□□□ 0.14
SBDSP1-202ENST00000423945 CHST2Q9Y4C5 530 aa15.9■□□□□ 0.14
SBDSP1-202ENST00000423945 HIVEP1P15822 2718 aa15.9■□□□□ 0.14
SBDSP1-202ENST00000423945 F8P00451 2351 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 TRBV5-3A0A0A0MS03 114 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 NR5A2O00482 541 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 SMAD9O15198 467 aaKnown RBP15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 DBIP07108 87 aaKnown RBP15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 BMP2P12643 396 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 SLC7A1P30825 629 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 POU4F3Q15319 338 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 ZNF836Q6ZNA1 936 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 ZNF550Q7Z398 422 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 ADGRG3Q86Y34 549 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 TUSC5Q8IXB3 177 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 ZNF563Q8TA94 476 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 SPDL1Q96EA4 605 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 OR5B2Q96R09 309 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 RSPO3Q9BXY4 272 aaPredicted RBP15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 TIGARQ9NQ88 270 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 RLIMQ9NVW2 624 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 KLHL28Q9NXS3 571 aa15.89■□□□□ 0.13
SBDSP1-202ENST00000423945 CLIC1O00299 241 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 IL7RP16871 459 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 APOBEC1P41238 236 aaKnown RBP15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 IDH2P48735 452 aaKnown RBP15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 IST1P53990 364 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 EPS8Q12929 822 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 EXOC3L2Q2M3D2 409 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 AGKQ53H12 422 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 SYT14P1Q58G82 188 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 STAC2Q6ZMT1 411 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 GRINAQ7Z429 371 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 OR52P1PQ8NH57 321 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 MAL2Q969L2 176 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 ARL5BQ96KC2 179 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 PSD2Q9BQI7 771 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 SLC39A3Q9BRY0 314 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 IKZF5Q9H5V7 419 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 C12orf49Q9H741 205 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 PLEKHF2Q9H8W4 249 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 VAPAQ9P0L0 249 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 KLHL13Q9P2N7 655 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 CHRNA9Q9UGM1 479 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 NDRG3Q9UGV2 375 aa15.88■□□□□ 0.13
SBDSP1-202ENST00000423945 CDHR4A6H8M9 788 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 DEFB108AA8MXU0 73 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 C16orf97H3BN30 126 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 FAAHO00519 579 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 PRKD3O94806 890 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 GOSR1O95249 250 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 PABPC4LP0CB38 370 aaKnown RBP15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 EDNRAP25101 427 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 ACAA2P42765 397 aaKnown RBP15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 KCNJ5P48544 419 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 DIO1P49895 249 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 CRISP3P54108 245 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 SQLEQ14534 574 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 RNPS1Q15287 305 aaKnown RBP15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 ANKRD34AQ69YU3 496 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 GTF2IRD2BQ6EKJ0 949 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 TMPPEQ6ZT21 453 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 GTF2IRD2Q86UP8 949 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 PEX5LQ8IYB4 626 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 CLIP4Q8N3C7 705 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 DNAJA3Q96EY1 480 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 OR11A1Q9GZK7 315 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 NPHS2Q9NP85 383 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 A4GALTQ9NPC4 353 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 SERINC1Q9NRX5 453 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 TMEM45AQ9NWC5 275 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 ST6GALNAC2Q9UJ37 374 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 DCTN4Q9UJW0 460 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 OSGIN1Q9UJX0 560 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 ZNF443Q9Y2A4 671 aaPredicted RBP15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 GMEB1Q9Y692 573 aa15.87■□□□□ 0.13
SBDSP1-202ENST00000423945 CYTIPO60759 359 aa15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 THBDP07204 575 aa15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 FESP07332 822 aa15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 GKN3PP0CG01 181 aa15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 LOXP28300 417 aaPredicted RBP15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 FADDQ13158 208 aa15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 DLEU7Q6UYE1 221 aa15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 TFAP2EQ6VUC0 442 aa15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 SLC25A43Q8WUT9 341 aaPredicted RBP15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 REXO5Q96IC2 774 aaKnown RBP15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 ZNF300Q96RE9 604 aaPredicted RBP15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 KLHL4Q9C0H6 718 aa15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 BCO1Q9HAY6 547 aa15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 GP6Q9HCN6 339 aa15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 BCL2L10Q9HD36 194 aa15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 CALML5Q9NZT1 146 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms