RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 EIPR1Q53HC9 387 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 ANKRD54Q6NXT1 300 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 RANBP3LQ86VV4 465 aaPredicted RBP9.07□□□□□ -0.96
MSH2-202ENST00000406134 C9orf62Q8N4C0 152 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 BAHD1Q8TBE0 780 aaPredicted RBP9.07□□□□□ -0.96
MSH2-202ENST00000406134 ASB12Q8WXK4 309 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 YIPF5Q969M3 257 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 CREB3L1Q96BA8 519 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 SCMH1Q96GD3 660 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 TNFRSF13CQ96RJ3 184 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 PBX4Q9BYU1 374 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 FAM60AQ9NP50 221 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 SPTBP11277 2137 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 EXPH5Q8NEV8 1989 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 TBC1D3DA0A087WVF3 549 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 TBC1D3IA0A087WXS9 549 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 TBC1D3EA0A087X179 549 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 SHISA7A6NL88 538 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 TBC1D3LB9A6J9 549 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 GALR3O60755 368 aaPredicted RBP9.06□□□□□ -0.96
MSH2-202ENST00000406134 TPPPO94811 219 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 TBC1D3HP0C7X1 549 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 AHCYP23526 432 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 RBMS1P29558 406 aaKnown RBP9.06□□□□□ -0.96
MSH2-202ENST00000406134 UBE2IP63279 158 aaKnown RBP9.06□□□□□ -0.96
MSH2-202ENST00000406134 ADAM15Q13444 863 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 GGTLC2Q14390 218 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 ITPRIPL2Q3MIP1 535 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 AMZ1Q400G9 498 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 TBC1D3CQ6IPX1 549 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 SDE2Q6IQ49 451 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 RRM2BQ7LG56 351 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 GRAMD2AQ8IUY3 354 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 TBC1D3Q8IZP1 549 aaPredicted RBP9.06□□□□□ -0.96
MSH2-202ENST00000406134 FRMD1Q8N878 549 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 TEX19Q8NA77 164 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 ACOT12Q8WYK0 555 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 SMPDL3BQ92485 455 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 PELI1Q96FA3 418 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.06□□□□□ -0.962e-11■■■■■ 37.1
MSH2-202ENST00000406134 SYNDIG1Q9H7V2 258 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 SLC13A4Q9UKG4 626 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 COPS3Q9UNS2 423 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 A0A1B0GWA3 101 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 C7orf66A4D0T2 115 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 OR6C74A6NCV1 312 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 LRRC72A6NJI9 287 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 CENPBD1B2RD01 187 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 OGG1O15527 345 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 B3GALT2O43825 422 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 ALX3O95076 343 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 CD53P19397 219 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 TRIQKQ629K1 86 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 ZNF613Q6PF04 617 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 ARL9Q6T311 187 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 PLET1Q6UQ28 207 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 LYPD4Q6UWN0 246 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 LRRC17Q8N6Y2 441 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 DNAJC5GQ8N7S2 189 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 CDRT4Q8N9R6 151 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 OR10H4Q8NGA5 316 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 THAP4Q8WY91 577 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 KLHDC3Q9BQ90 382 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 THAP7Q9BT49 309 aaPredicted RBP9.06□□□□□ -0.96
MSH2-202ENST00000406134 LMF2Q9BU23 707 aaKnown RBP9.06□□□□□ -0.96
MSH2-202ENST00000406134 TTTY10Q9BZA0 68 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 INPP5EQ9NRR6 644 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 SLC35A3Q9Y2D2 325 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 FER1L5A0AVI2 2057 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 LRRN3E7EW58 273 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 NTSR1P30989 418 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 FBXO46Q6PJ61 603 aaPredicted RBP9.06□□□□□ -0.96
MSH2-202ENST00000406134 ESPNLQ6ZVH7 1005 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 LSMEM1Q8N8F7 131 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 OR11H4Q8NGC9 324 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 OR51A7Q8NH64 312 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 GRHL3Q8TE85 626 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 RGP1Q92546 391 aaPredicted RBP9.06□□□□□ -0.96
MSH2-202ENST00000406134 LRRN3Q9H3W5 708 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 NIPAL2Q9H841 368 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 C2orf42Q9NWW7 574 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 SLCO1B1Q9Y6L6 691 aa9.06□□□□□ -0.96
MSH2-202ENST00000406134 DAPL1A0PJW8 107 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 MCIDASD6RGH6 385 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 PIN1P1O15428 100 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 GPR75O95800 540 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 LAMP2P13473 410 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 HIST1H1CP16403 213 aaKnown RBP9.05□□□□□ -0.96
MSH2-202ENST00000406134 ACVR1BP36896 505 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 RAB25P57735 213 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 SLC3A1Q07837 685 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 NDUFAF6Q330K2 333 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 TMEM255AQ5JRV8 349 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 ZNF684Q5T5D7 378 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 KIRREL2Q6UWL6 708 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 OTULINQ96BN8 352 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 ZFYVE21Q9BQ24 234 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 GTPBP2Q9BX10 602 aaKnown RBP9.05□□□□□ -0.96
MSH2-202ENST00000406134 TRIM36Q9NQ86 728 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 SLC22A31A6NKX4 558 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms