RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 WISP1O95388 367 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 LYNP07948 512 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 MAKP20794 623 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CXCR1P25024 350 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CYB561P49447 251 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CRISP1P54107 249 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 GPR85P60893 370 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 MYBPC1Q00872 1141 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 AIMP2Q13155 320 aaKnown RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 ABHD17BQ5VST6 288 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 SLC22A10Q63ZE4 541 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 USP51Q70EK9 711 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 MISPQ8IVT2 679 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 OR4K17Q8NGC6 315 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 GNPDA2Q8TDQ7 276 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 OIT3Q8WWZ8 545 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 PSMF1Q92530 271 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 NXPE2Q96DL1 559 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 MPP4Q96JB8 637 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 IP6K3Q96PC2 410 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 NR1H4Q96RI1 486 aaPredicted RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 APOL4Q9BPW4 351 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 DGCR6LQ9BY27 220 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 GABARAPL3Q9BY60 117 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 PLA2G12AQ9BZM1 189 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 EVA1AQ9H8M9 152 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 MEPEQ9NQ76 525 aaPredicted RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 SDHAF3Q9NRP4 125 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 PNPLA3Q9NST1 481 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 TAS2R10Q9NYW0 307 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 REV1Q9UBZ9 1251 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ENOPH1Q9UHY7 261 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 FBXL2Q9UKC9 423 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 WIF1Q9Y5W5 379 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 TRAV27A0A087WT01 109 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 A0A087WUJ7 227 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 MAGEA13PA6NCF6 341 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 B4DXG7 233 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 DXOO77932 396 aaKnown RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 CH25HO95992 272 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 PNMTP11086 282 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ATP6V1B1P15313 513 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 WT1P19544 449 aaPredicted RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 GSTM3P21266 225 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 EEF1B2P24534 225 aaKnown RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 ZNF41P51814 821 aaPredicted RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 ESRRGP62508 458 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CD47Q08722 323 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 COX10Q12887 443 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 TSPAN31Q12999 210 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 RTP5Q14D33 572 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 TOMM20Q15388 145 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ZNF691Q5VV52 312 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 SPINK14Q6IE38 97 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 OAFQ86UD1 273 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 RNF113BQ8IZP6 322 aaKnown RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 PARP8Q8N3A8 854 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 GALNT16Q8N428 558 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 SETD9Q8NE22 299 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 BPIFB6Q8NFQ5 453 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 OR5M1Q8NGP8 315 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 TEX47Q8TBZ9 253 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 GPR119Q8TDV5 335 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 GATA6Q92908 595 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 HRASLS5Q96KN8 279 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 HS6ST2Q96MM7 605 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 GNRHR2Q96P88 292 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 IL4I1Q96RQ9 567 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 PSD2Q9BQI7 771 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 LHPPQ9H008 270 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 TVP23BQ9NYZ1 205 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 PLA2G3Q9NZ20 509 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 OSGIN1Q9UJX0 560 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 NDRG4Q9ULP0 352 aaKnown RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 HRH3Q9Y5N1 445 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 EML6Q6ZMW3 1958 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 UNC119BA6NIH7 251 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 EFCAB9A8MZ26 197 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 PTGES3LE9PB15 166 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 KLK10O43240 276 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 SLC25A12O75746 678 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 TNFAIP8O95379 198 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 OPN1LWP04000 364 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 P04436 131 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 FPR3P25089 353 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 FMO3P31513 532 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 PTGDSP41222 190 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 RPS5P46782 204 aaKnown RBP3.37□□□□□ -1.87
RTN4-208ENST00000404909 DNASE1L1P49184 302 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 CCL11P51671 97 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 GAS1P54826 345 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 MLLT10P55197 1068 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 CDC42P60953 191 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 ISL1P61371 349 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 CLN3Q13286 438 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 KEAP1Q14145 624 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 GINS1Q14691 196 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 CTU2Q2VPK5 515 aaKnown RBP3.37□□□□□ -1.87
RTN4-208ENST00000404909 TBC1D25Q3MII6 688 aa3.37□□□□□ -1.87
RTN4-208ENST00000404909 GXYLT1Q4G148 440 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms