RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 GPLD1P80108 840 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 OR10A5Q9H207 317 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 OR10A2Q9H208 303 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 CHMP24386 653 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 SEC61A1P61619 476 aaKnown RBP13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 GLO1Q04760 184 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 GPR50Q13585 617 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 PIGCQ92535 297 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 SULT4A1Q9BR01 284 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 FUNDC2Q9BWH2 189 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 KIAA0100Q14667 2235 aaKnown RBP13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 LOC285095A0A1B0GVY8 99 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 KDM4EB2RXH2 506 aaPredicted RBP13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 LRRTM2O43300 516 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 C1orf105O95561 183 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 ETV4P43268 484 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 NKX2-5P52952 324 aaPredicted RBP13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 MZT1Q08AG7 82 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 MS4A15Q8N5U1 240 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 OR56B2PQ8NGI1 322 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 OR1S1Q8NH92 325 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 ITFG2Q969R8 447 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 ZNF681Q96N22 645 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 GABRR3A8MPY1 467 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 C5orf67F2Z3F1 127 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 CDK2P24941 298 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 MPLP40238 635 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 OR5L1Q8NGL2 311 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 NOSIPQ9Y314 301 aaKnown RBP13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 MYH10P35580 1976 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 BLACEA4D250 179 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 KRBA1A5PL33 1030 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 TRIM64CA6NLI5 447 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 TMEM176BQ3YBM2 270 aaPredicted RBP13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 RTP4Q96DX8 246 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 FOLH1BQ9HBA9 442 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 MYH7BA7E2Y1 1941 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 NOTOA8MTQ0 251 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 RNASET2O00584 256 aaKnown RBP13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 TNFRSF10CO14798 259 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 SDC1P18827 310 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 BMXP51813 675 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 LUMP51884 338 aaPredicted RBP13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 S100A12P80511 92 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 TXNDC15Q96J42 360 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 TSNAXQ99598 290 aaKnown RBP13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 PLA2G2FQ9BZM2 168 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 GSTO2Q9H4Y5 243 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 ARHGEF15O94989 841 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 CMTM1Q8IZ96 169 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 CCDC71LQ8N9Z2 235 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 ULBP2Q9BZM5 246 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 LHPPQ9H008 270 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 INIPQ9NRY2 104 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 NLKQ9UBE8 527 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 NXT1Q9UKK6 140 aaKnown RBP13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 FANCGO15287 622 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 SERPINA2P20848 420 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 C6orf15Q6UXA7 325 aaPredicted RBP13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 MMP21Q8N119 569 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 ARRDC2Q8TBH0 407 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 C22orf15Q8WYQ4 148 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 THOC3Q96J01 351 aaKnown RBP13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 COG8Q96MW5 612 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 OR7D2Q96RA2 312 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 ACPTQ9BZG2 426 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 SLC6A16Q9GZN6 736 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 PITHD1Q9GZP4 211 aaPredicted RBP13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 PADI1Q9ULC6 663 aa13.29□□□□□ -0.28
PCDHA11-201ENST00000398640 A0A087WUU8 490 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 C17orf113A0A1B0GUU1 675 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 LOC102725191A0A1B0GVB3 256 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 PRKYO43930 277 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 SLC16A7O60669 478 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 SRPX2O60687 465 aaPredicted RBP13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 LIPCP11150 499 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 ZNF44P15621 663 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 ZNF136P52737 540 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 MCCD1P59942 119 aaPredicted RBP13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 FGL1Q08830 312 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 NIPAL3Q6P499 406 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 ZFPM2Q8WW38 1151 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 COQ3Q9NZJ6 369 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 TP53TG5Q9Y2B4 290 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 ELF4Q99607 663 aaPredicted RBP13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 GCM1Q9NP62 436 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 FAIMQ9NVQ4 179 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 A0A1W2PQL4 384 aaPredicted RBP13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 UGDHO60701 494 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 DDAH2O95865 285 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 ACTBP60709 375 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 ACTG1P63261 375 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 GPR139Q6DWJ6 353 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 VASNQ6EMK4 673 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 TMEM178AQ8NBL3 297 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 OR5K2Q8NHB8 316 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 H1FXQ92522 213 aaKnown RBP13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 CACNG6Q9BXT2 260 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 SNNO75324 88 aaPredicted RBP13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 IGFBP6P24592 240 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms