RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 TMEM233B4DJY2 109 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 LMX1BO60663 402 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 ITGA5P08648 1049 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 KRT16P08779 473 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 SRD5A1P18405 259 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 USF1P22415 310 aaPredicted RBP13.49□□□□□ -0.25
CHMP3-202ENST00000393773 NTF4P34130 210 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 CCT3P49368 545 aaKnown RBP13.49□□□□□ -0.25
CHMP3-202ENST00000393773 FABP6P51161 128 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 EFNA4P52798 201 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 SLC25A3Q00325 362 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 CHRNEQ04844 493 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 TMPPEQ6ZT21 453 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 UBE2J2Q8N2K1 259 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 OR5D16Q8NGK9 328 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 APH1AQ96BI3 265 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 OR7D2Q96RA2 312 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 NMUR2Q9GZQ4 415 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 TAS2R16Q9NYV7 291 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 GIMAP2Q9UG22 337 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 FAF1Q9UNN5 650 aaPredicted RBP13.49□□□□□ -0.25
CHMP3-202ENST00000393773 TRAF6Q9Y4K3 522 aa13.49□□□□□ -0.25
CHMP3-202ENST00000393773 CIB4A0PJX0 185 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 SERINC4A6NH21 518 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 M0R1B8 84 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 PDLIM1O00151 329 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 HAX1O00165 279 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 SULT2B1O00204 365 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 URI1O94763 535 aaPredicted RBP13.48□□□□□ -0.25
CHMP3-202ENST00000393773 C6orf47O95873 294 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 GZMKP49863 264 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 SLC16A1P53985 500 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 SESN3P58005 492 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 CSNK2A1P68400 391 aaPredicted RBP13.48□□□□□ -0.25
CHMP3-202ENST00000393773 LSM11P83369 360 aaKnown RBP eCLIP13.48□□□□□ -0.257e-8■□□□□ 11.1
CHMP3-202ENST00000393773 PTGR1Q14914 329 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 PCLAFQ15004 111 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 ZNF141Q15928 474 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 GABRA6Q16445 453 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 MTDHQ86UE4 582 aaKnown RBP13.48□□□□□ -0.25
CHMP3-202ENST00000393773 FAM71CQ8NEG0 241 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 OR5AK3PQ8NH89 298 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 SLC25A43Q8WUT9 341 aaPredicted RBP13.48□□□□□ -0.25
CHMP3-202ENST00000393773 OR5P2Q8WZ92 322 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 SDF2Q99470 211 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 THUMPD3Q9BV44 507 aaKnown RBP13.48□□□□□ -0.25
CHMP3-202ENST00000393773 TXLNGYQ9BZA5 131 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 LAT2Q9GZY6 243 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 CHODLQ9H9P2 273 aa13.48□□□□□ -0.25
CHMP3-202ENST00000393773 NOSIPQ9Y314 301 aaKnown RBP13.48□□□□□ -0.25
CHMP3-202ENST00000393773 PIP5K1BO14986 540 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 CPA3P15088 417 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 DDX5P17844 614 aaKnown RBP13.47□□□□□ -0.25
CHMP3-202ENST00000393773 RPL3P39023 403 aaKnown RBP13.47□□□□□ -0.25
CHMP3-202ENST00000393773 RPS26P62854 115 aaKnown RBP13.47□□□□□ -0.25
CHMP3-202ENST00000393773 MERTKQ12866 999 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 XKR7Q5GH72 579 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 FAM120AOSQ5T036 256 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 FAM166AQ6J272 317 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 OLIG3Q7RTU3 272 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 LSRQ86X29 649 aaPredicted RBP13.47□□□□□ -0.25
CHMP3-202ENST00000393773 CNPY4Q8N129 248 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 WDR31Q8NA23 367 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 TWIST2Q8WVJ9 160 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 ARL8AQ96BM9 186 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 MUS81Q96NY9 551 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 CCDC106Q9BWC9 280 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 PRR14Q9BWN1 585 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 GATA5Q9BWX5 397 aaPredicted RBP13.47□□□□□ -0.25
CHMP3-202ENST00000393773 ACER3Q9NUN7 267 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 ASB6Q9NWX5 421 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 KCNS2Q9ULS6 477 aa13.47□□□□□ -0.25
CHMP3-202ENST00000393773 CCT8L1PA6NM43 557 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 TMEM114B3SHH9 223 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 ATP6V1G2-DDX39BF2Z307 99 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 BCAS1O75363 584 aaPredicted RBP13.46□□□□□ -0.25
CHMP3-202ENST00000393773 UGT2B17O75795 530 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 PMS2P2O95744 297 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 CHEK2O96017 543 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 FAM153BP0C7A2 387 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 CRHR1P34998 444 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 PHC1P78364 1004 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 PLAURQ03405 335 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 GGTLC2Q14390 218 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 UGT3A2Q3SY77 523 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 FAM153CQ494X1 144 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 SPDYE7PQ495Y7 208 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 OR7E24Q6IFN5 339 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 C10orf107Q8IVU9 208 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 DDIASQ8IXT1 998 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 DEPDC4Q8N2C3 294 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 C1orf162Q8NEQ5 155 aaPredicted RBP13.46□□□□□ -0.25
CHMP3-202ENST00000393773 OR52E4Q8NGH9 312 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 PIGXQ8TBF5 258 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 MOAP1Q96BY2 351 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 MSI2Q96DH6 328 aaKnown RBP13.46□□□□□ -0.25
CHMP3-202ENST00000393773 ARL5BQ96KC2 179 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 C16orf45Q96MC5 204 aaPredicted RBP13.46□□□□□ -0.25
CHMP3-202ENST00000393773 SORCS2Q96PQ0 1159 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 TRMOQ9BU70 441 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms