RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 A0A1W2PS29 197 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 NPIPB8E9PQR5 432 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 FAM227AF5H4B4 570 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 SCAMP2O15127 329 aaKnown RBP4.59□□□□□ -1.67
PTPRD-203ENST00000381196 SLC34A2O95436 690 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 MT-CYBP00156 380 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-203ENST00000381196 LPLP06858 475 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 FABP1P07148 127 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 HOXA9P31269 272 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 RPL7AP62424 266 aaKnown RBP4.59□□□□□ -1.67
PTPRD-203ENST00000381196 RAB31Q13636 194 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 TAS1R3Q7RTX0 852 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 OR56B1Q8NGI3 324 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 AMDHD1Q96NU7 426 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 C12orf57Q99622 126 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 SLC35A5Q9BS91 424 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 RIPK3Q9Y572 518 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 M0R143 59 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 NDUFS8O00217 210 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 DVL1O14640 695 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 FADS1O60427 444 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 ECI2O75521 394 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 OLFM2O95897 454 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 OR5AC1P0C628 307 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 HNRNPLP14866 589 aaKnown RBP eCLIP4.59□□□□□ -1.68
PTPRD-203ENST00000381196 FMO3P31513 532 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 NPY4RP50391 375 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 DVL1P1P54792 670 aaPredicted RBP4.59□□□□□ -1.68
PTPRD-203ENST00000381196 CTBP1Q13363 440 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 SLC17A1Q14916 467 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 TMEM220Q6QAJ8 160 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 SLC29A4Q7RTT9 530 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 FAM86B1Q8N7N1 296 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 SUMF2Q8NBJ7 301 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 OR7D4Q8NG98 312 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 FAM46BQ96A09 425 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 PTGES2Q9H7Z7 377 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 TIGARQ9NQ88 270 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 POU2F3Q9UKI9 436 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 U3KQV3 271 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 TRBC2A0A5B9 178 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 TMEM72A0PK05 275 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 SLC22A23A1A5C7 686 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 FOXE1O00358 373 aaPredicted RBP4.59□□□□□ -1.68
PTPRD-203ENST00000381196 GPR39O43194 453 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 MFSD11O43934 449 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 MED6O75586 246 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 CT45A8P0DMV1 189 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 CT45A9P0DMV2 189 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 KCNE1P15382 129 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 SLC11A1P49279 550 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 CLCN7P51798 805 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 POLR2HP52434 150 aaKnown RBP4.59□□□□□ -1.68
PTPRD-203ENST00000381196 MANFP55145 182 aaKnown RBP4.59□□□□□ -1.68
PTPRD-203ENST00000381196 CAMK2BQ13554 666 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 GUCA2BQ16661 112 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 CT45A2Q5DJT8 189 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 FOXB2Q5VYV0 432 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 LYSMD4Q5XG99 296 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 SLC8B1Q6J4K2 584 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 GPR153Q6NV75 609 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 RANBP10Q6VN20 620 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 TMEM173Q86WV6 379 aaPredicted RBP4.59□□□□□ -1.68
PTPRD-203ENST00000381196 METTL7AQ9H8H3 244 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 MAN2C1Q9NTJ4 1040 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 C1orf123Q9NWV4 160 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 GNG13Q9P2W3 67 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 GPR45Q9Y5Y3 372 aa4.59□□□□□ -1.68
PTPRD-203ENST00000381196 DNMT3AQ9Y6K1 912 aaPredicted RBP4.59□□□□□ -1.68
PTPRD-203ENST00000381196 NSG1A0A0A6YYJ2 146 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 A6NIZ1 184 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 CER1O95813 267 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 CLIC3O95833 236 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF8P17098 575 aaPredicted RBP4.58□□□□□ -1.68
PTPRD-203ENST00000381196 GPX3P22352 226 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 TIA1P31483 386 aaKnown RBP eCLIP4.58□□□□□ -1.68
PTPRD-203ENST00000381196 RAP1BP61224 184 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 RAP1AP62834 184 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 MOGAT2Q3SYC2 334 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 ALG1LQ6GMV1 187 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 CBLL1Q75N03 491 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 IGDCC3Q8IVU1 814 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 L3MBTL4Q8NA19 623 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 ZMIZ2Q8NF64 920 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF461Q8TAF7 563 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 NT5C3BQ969T7 300 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 RPL10LQ96L21 214 aaKnown RBP4.58□□□□□ -1.68
PTPRD-203ENST00000381196 EXOSC3Q9NQT5 275 aaKnown RBP4.58□□□□□ -1.68
PTPRD-203ENST00000381196 TESQ9UGI8 421 aaKnown RBP4.58□□□□□ -1.68
PTPRD-203ENST00000381196 RARRES3Q9UL19 164 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 A0A0U1RQF3 1178 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 LDB2O43679 373 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 HEXAP06865 529 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF823P16415 610 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 S1PR1P21453 382 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 HOXD13P35453 343 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 KIAA1024LP59773 190 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 HMGCS1Q01581 520 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 RAPSNQ13702 412 aa4.58□□□□□ -1.68
PTPRD-203ENST00000381196 C2orf76Q3KRA6 126 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms