RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 PHB2Q99623 299 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 METTL17Q9H7H0 456 aaPredicted RBP12.8□□□□□ -0.36
VCP-201ENST00000358901 FBRSQ9HAH7 460 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 PLAC1Q9HBJ0 212 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 ZNF226Q9NYT6 803 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 CPNE7Q9UBL6 633 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 SCML1Q9UN30 329 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 ADAMTSL3P82987 1691 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 PLPP1O14494 284 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 ABLIM3O94929 683 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 CSF1P09603 554 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 GJA4P35212 333 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 ERVFC1P60507 584 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 CSNK2A1P68400 391 aaPredicted RBP12.8□□□□□ -0.36
VCP-201ENST00000358901 MFSD13AQ14CX5 517 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 OXA1LQ15070 435 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 SMAD2Q15796 467 aaKnown RBP12.8□□□□□ -0.36
VCP-201ENST00000358901 OR7E24Q6IFN5 339 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 SLC16A11Q8NCK7 471 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 CSNK2A3Q8NEV1 391 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 OR5H6Q8NGV6 325 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 PCNPQ8WW12 178 aaKnown RBP12.8□□□□□ -0.36
VCP-201ENST00000358901 SLC35B4Q969S0 331 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 OR2M2Q96R28 347 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 CORINQ9Y5Q5 1042 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 A3GALT2U3KPV4 340 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 TCRBV5S2A0A599 114 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 ZNF14P17017 642 aaPredicted RBP12.8□□□□□ -0.36
VCP-201ENST00000358901 SLC26A5P58743 744 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 RPL19P84098 196 aaKnown RBP12.8□□□□□ -0.36
VCP-201ENST00000358901 AFMIDQ63HM1 303 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 ZNF704Q6ZNC4 412 aaPredicted RBP12.8□□□□□ -0.36
VCP-201ENST00000358901 KCTD12Q96CX2 325 aaKnown RBP12.8□□□□□ -0.36
VCP-201ENST00000358901 BORCS8Q96FH0 119 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 SNX18Q96RF0 628 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 KATNB1Q9BVA0 655 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 TM7SF3Q9NS93 570 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 ACER3Q9NUN7 267 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 MED17Q9NVC6 651 aa12.8□□□□□ -0.36
VCP-201ENST00000358901 CDC14CA4D256 554 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 GPRIN2O60269 458 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 AKAIN1P0CW23 69 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 ARSBP15848 533 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 EPHA2P29317 976 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 TGFBR1P36897 503 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 GPR50Q13585 617 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 SLC6A19Q695T7 634 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 HBMQ6B0K9 141 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 LYPD4Q6UWN0 246 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 SIMC1Q8NDZ2 872 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 OR56B4Q8NH76 319 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 HAVCR2Q8TDQ0 301 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 TOMM40LQ969M1 308 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 LMF2Q9BU23 707 aaKnown RBP12.79□□□□□ -0.36
VCP-201ENST00000358901 SAV1Q9H4B6 383 aaPredicted RBP12.79□□□□□ -0.36
VCP-201ENST00000358901 TESQ9UGI8 421 aaKnown RBP12.79□□□□□ -0.36
VCP-201ENST00000358901 ZNF337Q9Y3M9 751 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 RNF215Q9Y6U7 377 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 TMX2-CTNND1H3BSU7 103 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 SSX5O60225 188 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 TRIM23P36406 574 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 OPRD1P41143 372 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 TM4SF4P48230 202 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 PXNP49023 591 aaPredicted RBP12.79□□□□□ -0.36
VCP-201ENST00000358901 RHEBQ15382 184 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 LINC00299Q6ZSB3 139 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 ASF1BQ9NVP2 202 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 HHLA2Q9UM44 414 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 TTC3P53804 2025 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 TMEM72A0PK05 275 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 CD1EP15812 388 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 SLC6A8P48029 635 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 TBC1D25Q3MII6 688 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 MBOAT2Q6ZWT7 520 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 PXKQ7Z7A4 578 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 TMEM179BQ7Z7N9 219 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 INIPQ9NRY2 104 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 A0A0A6YYH2 397 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 KIR2DS5A0A0G2JLQ3 304 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 A0A0G2JNG1 304 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 A6NJ64 397 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 KIR2DS3K7RE56 304 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 SLC33A1O00400 549 aaPredicted RBP12.79□□□□□ -0.36
VCP-201ENST00000358901 RRAS2P62070 204 aaPredicted RBP12.79□□□□□ -0.36
VCP-201ENST00000358901 KIR2DS5Q14953 304 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 NXNL2Q5VZ03 156 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 OR5M10Q6IEU7 315 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 UEVLDQ8IX04 471 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 RNF113BQ8IZP6 322 aaKnown RBP12.79□□□□□ -0.36
VCP-201ENST00000358901 TMEM255BQ8WV15 326 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 GIMAP1Q8WWP7 306 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 RBM24Q9BX46 236 aaKnown RBP12.79□□□□□ -0.36
VCP-201ENST00000358901 LDAHQ9H6V9 325 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 A4GALTQ9NPC4 353 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 RARRES3Q9UL19 164 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 SLC6A5Q9Y345 797 aa12.79□□□□□ -0.36
VCP-201ENST00000358901 ANKRD36CQ5JPF3 1778 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 MAST2Q6P0Q8 1798 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 F8W036 122 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 GFYI3L273 518 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms