RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 GKN3PP0CG01 181 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 CERS1P27544 350 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 GABRR2P28476 465 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 KIR3DL2P43630 455 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 OR10A3P58181 314 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 CXADRP78310 365 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 PSAPL1Q6NUJ1 521 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 ADAM5Q6NVV9 412 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 FIGNL1Q6PIW4 674 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 ESPNLQ6ZVH7 1005 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 TMPRSS11FQ6ZWK6 438 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 RABEPKQ7Z6M1 372 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 PIANPQ8IYJ0 282 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 CELF5Q8N6W0 485 aaKnown RBP11.01□□□□□ -0.65
SHMT2-201ENST00000328923 DOHHQ9BU89 302 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 P2RY12Q9H244 342 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 PPT2Q9UMR5 302 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 PCDHB1Q9Y5F3 818 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 PRAMEF25A6NGN4 478 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 ACOD1A6NK06 481 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 H7C1Q1 480 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 FADS1O60427 444 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 INHAP05111 366 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 C1SP09871 688 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 C1GALT1C1LP0DN25 315 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 PAX1P15863 534 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 RAB5AP20339 215 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 LPOP22079 712 aaPredicted RBP11□□□□□ -0.65
SHMT2-201ENST00000328923 MAPK3P27361 379 aaPredicted RBP11□□□□□ -0.65
SHMT2-201ENST00000328923 CEACAM6P40199 344 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 THPOP40225 353 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 STAT5AP42229 794 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 KIR3DL1P43629 444 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 GPR3P46089 330 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 CDX1P47902 265 aaPredicted RBP11□□□□□ -0.65
SHMT2-201ENST00000328923 INSM1Q01101 510 aaPredicted RBP11□□□□□ -0.65
SHMT2-201ENST00000328923 DOC2AQ14183 400 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 SLBPQ14493 270 aaKnown RBP eCLIP11□□□□□ -0.65
SHMT2-201ENST00000328923 TIGD5Q53EQ6 642 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 TMEM35AQ53FP2 167 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 ATXN7L2Q5T6C5 722 aaPredicted RBP11□□□□□ -0.65
SHMT2-201ENST00000328923 HBMQ6B0K9 141 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 TECPR1Q7Z6L1 1165 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 SCD5Q86SK9 330 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 CDK20Q8IZL9 346 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 KLHDC9Q8NEP7 349 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 SCAMP5Q8TAC9 235 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 THEM6Q8WUY1 208 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 RGMAQ96B86 450 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 GAL3ST4Q96RP7 486 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 MGME1Q9BQP7 344 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 FAIM2Q9BWQ8 316 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 ACPTQ9BZG2 426 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 TPT1P8Q9HAU6 139 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 MRPS30Q9NP92 439 aaKnown RBP11□□□□□ -0.65
SHMT2-201ENST00000328923 MYOZ1Q9NP98 299 aaPredicted RBP11□□□□□ -0.65
SHMT2-201ENST00000328923 PARPBPQ9NWS1 579 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 ELOVL2Q9NXB9 296 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 RHCGQ9UBD6 479 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 CORO2BQ9UQ03 480 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 GAB2Q9UQC2 676 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 RCE1Q9Y256 329 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 OR14I1A6ND48 311 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 ARL5CA6NH57 179 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 E7EQ34 232 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 F5H5P2 479 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 GOSR2O14653 212 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 EMC8O43402 210 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 LRATO95237 230 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 GUCA1CO95843 209 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 RPLP2P05387 115 aaKnown RBP11□□□□□ -0.65
SHMT2-201ENST00000328923 CELP19835 753 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 MC4RP32245 332 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 GDNFP39905 211 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 CD200P41217 278 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 GMFBP60983 142 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 MRPS10P82664 201 aaKnown RBP11□□□□□ -0.65
SHMT2-201ENST00000328923 ZXDBP98169 803 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 HEPACAMQ14CZ8 416 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 MS4A13Q5J8X5 152 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 ANXA8L1Q5VT79 327 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 ZNF385CQ66K41 422 aaPredicted RBP11□□□□□ -0.65
SHMT2-201ENST00000328923 GDPD4Q6W3E5 623 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 IZUMO1Q8IYV9 350 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 HUS1BQ8NHY5 278 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 TM6SF2Q9BZW4 377 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 ZDHHC5Q9C0B5 715 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 FBXO44Q9H4M3 255 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 PTGES2Q9H7Z7 377 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 NMNAT1Q9HAN9 279 aaPredicted RBP11□□□□□ -0.65
SHMT2-201ENST00000328923 PDFQ9HBH1 243 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 CBLCQ9ULV8 474 aa11□□□□□ -0.65
SHMT2-201ENST00000328923 TIMM13Q9Y5L4 95 aaPredicted RBP11□□□□□ -0.65
SHMT2-201ENST00000328923 MRPL42Q9Y6G3 142 aaKnown RBP11□□□□□ -0.65
SHMT2-201ENST00000328923 ARRDC5A6NEK1 342 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 ANKRD61A6NGH8 418 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 MAGEB17A8MXT2 336 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 BLOC1S5-TXNDC5H3BN57 136 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 DLEU1O43261 78 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 TLX2O43763 284 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms