RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 LRRC75AQ8NAA5 344 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 OR5AR1Q8NGP9 310 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 UBASH3BQ8TF42 649 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 SMAP2Q8WU79 429 aaPredicted RBP5.02□□□□□ -1.61
VPS50-202ENST00000305866 AP3S1Q92572 193 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 PNPLA2Q96AD5 504 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 SLC35A4Q96G79 324 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 TMED9Q9BVK6 235 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 GSX2Q9BZM3 304 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 LMAN2LQ9H0V9 348 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 HRASLSQ9HDD0 168 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 BRD7Q9NPI1 651 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 NUDT15Q9NV35 164 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 BABAM2Q9NXR7 383 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 EXTL2Q9UBQ6 330 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 GPR160Q9UJ42 338 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 MOSPD1Q9UJG1 213 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 ZFR2Q9UPR6 939 aaKnown RBP5.02□□□□□ -1.61
VPS50-202ENST00000305866 SIGLEC7Q9Y286 467 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 TMEM5Q9Y2B1 443 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 CLDN16Q9Y5I7 305 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 HEBP2Q9Y5Z4 205 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 TBC1D3KA0A087X1G2 549 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 TBC1D3BA6NDS4 549 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 TBC1D3FA6NER0 549 aaPredicted RBP5.01□□□□□ -1.61
VPS50-202ENST00000305866 ADAM10O14672 748 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 CCL16O15467 120 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 RGS11O94810 467 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 SSTR2P30874 369 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 BCL6P41182 706 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 RBM34P42696 430 aaKnown RBP5.01□□□□□ -1.61
VPS50-202ENST00000305866 CRMP1Q14194 572 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 FGL2Q14314 439 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 ZNF234Q14588 700 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 COL19A1Q14993 1142 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 HFEQ30201 348 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 ZNF528Q3MIS6 628 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 LINC01590Q5TEZ4 76 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 SP5Q6BEB4 398 aaPredicted RBP5.01□□□□□ -1.61
VPS50-202ENST00000305866 TBC1D3GQ6DHY5 549 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 RPTNQ6XPR3 784 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 ZNF836Q6ZNA1 936 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 HSD17B13Q7Z5P4 300 aaPredicted RBP5.01□□□□□ -1.61
VPS50-202ENST00000305866 HMGN2P46Q86SG4 172 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 MARCH9Q86YJ5 346 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 ACOT11Q8WXI4 607 aaPredicted RBP5.01□□□□□ -1.61
VPS50-202ENST00000305866 TFGQ92734 400 aaPredicted RBP5.01□□□□□ -1.61
VPS50-202ENST00000305866 OSTF1Q92882 214 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 RFT1Q96AA3 541 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 ELP4Q96EB1 424 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 MED8Q96G25 268 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 F2RL3Q96RI0 385 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 SCRT1Q9BWW7 348 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 OR2AG1Q9H205 316 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 MCCC2Q9HCC0 563 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 ING3Q9NXR8 418 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 CLDND1Q9NY35 253 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 ABT1Q9ULW3 272 aaKnown RBP5.01□□□□□ -1.61
VPS50-202ENST00000305866 FOXJ3Q9UPW0 622 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 NPFFR2Q9Y5X5 522 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 SCN3AQ9NY46 2000 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 KIAA1549Q9HCM3 1950 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 GNG14A0A1W2PPG7 69 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 A0A1W2PPL8 197 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 BLACEA4D250 179 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 RNF222A6NCQ9 220 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 TRABD2BA6NFA1 517 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 OTOL1A6NHN0 477 aaPredicted RBP5.01□□□□□ -1.61
VPS50-202ENST00000305866 HMSDA8MTL9 139 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 NPIPB9F8W1W9 429 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 AGRPO00253 132 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 IMPA2O14732 288 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 RGS5O15539 181 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 NME6O75414 186 aaPredicted RBP5.01□□□□□ -1.61
VPS50-202ENST00000305866 ZNF735P0CB33 412 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 PRKAR1AP10644 381 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 PRG2P13727 222 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 GABRA1P14867 456 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 DRD5P21918 477 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 GIFP27352 417 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 PSMB5P28074 263 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 ATP12AP54707 1039 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 DLX5P56178 289 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 NANOS3P60323 173 aaKnown RBP5.01□□□□□ -1.61
VPS50-202ENST00000305866 RPS4XP62701 263 aaKnown RBP5.01□□□□□ -1.61
VPS50-202ENST00000305866 HGFACQ04756 655 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 TRAM2Q15035 370 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 DCAF12L2Q5VW00 463 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 FAM46CQ5VWP2 391 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 NHLRC1Q6VVB1 395 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 NUDT18Q6ZVK8 323 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 RNF44Q7L0R7 432 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 MCATQ8IVS2 390 aaKnown RBP5.01□□□□□ -1.61
VPS50-202ENST00000305866 TIGD4Q8IY51 512 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 CMTM4Q8IZR5 234 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 SRFBP1Q8NEF9 429 aaKnown RBP5.01□□□□□ -1.61
VPS50-202ENST00000305866 ZNF431Q8TF32 576 aaPredicted RBP5.01□□□□□ -1.61
VPS50-202ENST00000305866 CYB5D2Q8WUJ1 264 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 PHYHIPQ92561 330 aa5.01□□□□□ -1.61
VPS50-202ENST00000305866 ATOH1Q92858 354 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms