RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 GCM1Q9NP62 436 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 TM7SF3Q9NS93 570 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 LRFN1Q9P244 771 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 ZNF337Q9Y3M9 751 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 CTDSP2O14595 271 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 SNAPC5O75971 98 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 MYOGP15173 224 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 CLDN12P56749 244 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 GPR18Q14330 331 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 LTC4SQ16873 150 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 ZNF750Q32MQ0 723 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 CCDC71LQ8N9Z2 235 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 OR8J2Q8NGG1 315 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 TMEM163Q8TC26 289 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 RPL3LQ92901 407 aaKnown RBP10.71□□□□□ -0.7
USP53-201ENST00000274030 ULBP3Q9BZM4 244 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 CAMK2AQ9UQM7 478 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 OR8G3PP0DMU2 310 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 BDKRB2P30411 391 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 DLSTP36957 453 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 WBP2NLQ6ICG8 309 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 VHLLQ6RSH7 139 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 CPT1CQ8TCG5 803 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 HEMK1Q9Y5R4 338 aaPredicted RBP10.71□□□□□ -0.7
USP53-201ENST00000274030 MYH1P12882 1939 aa10.71□□□□□ -0.7
USP53-201ENST00000274030 KIAA0100Q14667 2235 aaKnown RBP10.7□□□□□ -0.7
USP53-201ENST00000274030 EFCAB7A8K855 629 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 F8W036 122 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 SHOXO15266 292 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 ZFAND5O76080 213 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 GM2AP17900 193 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 GIPRP48546 466 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 POLR2HP52434 150 aaKnown RBP10.7□□□□□ -0.7
USP53-201ENST00000274030 BLOC1S1P78537 153 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 FGL2Q14314 439 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 BEX5Q5H9J7 111 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 DPY19L2P1Q6NXN4 242 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 FAM57BQ71RH2 274 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 ZNF587Q96SQ5 575 aaPredicted RBP10.7□□□□□ -0.7
USP53-201ENST00000274030 LMF2Q9BU23 707 aaKnown RBP10.7□□□□□ -0.7
USP53-201ENST00000274030 PBDC1Q9BVG4 233 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 PRSS16Q9NQE7 514 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 BABAM2Q9NXR7 383 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 TESQ9UGI8 421 aaKnown RBP10.7□□□□□ -0.7
USP53-201ENST00000274030 HHLA2Q9UM44 414 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 LRRC37A3O60309 1634 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 EGFP01133 1207 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 EN2P19622 333 aaPredicted RBP10.7□□□□□ -0.7
USP53-201ENST00000274030 ZNF691Q5VV52 312 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 ALKAL1Q6UXT8 129 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 SLC38A5Q8WUX1 472 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 PRR14Q9BWN1 585 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 ULBP2Q9BZM5 246 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 OR14J1Q9UGF5 321 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 TP53TG5Q9Y2B4 290 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 ASCC3Q8N3C0 2202 aaKnown RBP10.7□□□□□ -0.7
USP53-201ENST00000274030 BCAT2O15382 392 aaPredicted RBP10.7□□□□□ -0.7
USP53-201ENST00000274030 CSNK1DP48730 415 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 ZNF91Q05481 1191 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 SPCS2Q15005 226 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 EXOSC6Q5RKV6 272 aaKnown RBP10.7□□□□□ -0.7
USP53-201ENST00000274030 TSSK4Q6SA08 328 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 MOB3CQ70IA8 216 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 RBM12BQ8IXT5 1001 aaKnown RBP10.7□□□□□ -0.7
USP53-201ENST00000274030 LSMEM2Q8N112 164 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 MYADMQ96S97 322 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 HCAR1Q9BXC0 346 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 SAV1Q9H4B6 383 aaPredicted RBP10.7□□□□□ -0.7
USP53-201ENST00000274030 RLIMQ9NVW2 624 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 TAS2R16Q9NYV7 291 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 ACOD1A6NK06 481 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 SCRG1O75711 98 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 CBX7O95931 251 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 AKAIN1P0CW23 69 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 METTL11BQ5VVY1 283 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 GDPGP1Q6ZNW5 385 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 METTL4Q8N3J2 472 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 OR4K15Q8NH41 348 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 GATA6Q92908 595 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 ZBED3Q96IU2 234 aaPredicted RBP10.7□□□□□ -0.7
USP53-201ENST00000274030 TXNDC15Q96J42 360 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 KATNB1Q9BVA0 655 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 NUP188Q5SRE5 1749 aa10.7□□□□□ -0.7
USP53-201ENST00000274030 A0A1W2PQ09 198 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 CENPBD1B2RD01 187 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 HSPB6O14558 160 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 EDIL3O43854 480 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 PEX14O75381 377 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 ABOP16442 354 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 IL13RA1P78552 427 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 ZNF529Q6P280 563 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 MMP21Q8N119 569 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 DNAJC5GQ8N7S2 189 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 OR51J1Q9H342 316 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 OBP2BQ9NPH6 170 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 EDARQ9UNE0 448 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 SLC6A5Q9Y345 797 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 SOCS6O14544 535 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 HOXB5P09067 269 aa10.69□□□□□ -0.7
USP53-201ENST00000274030 IL32P24001 234 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms