RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 KRT73Q86Y46 540 aa12.81□□□□□ -0.36
SDHD-209ENST00000640554 MCEMP1Q8IX19 187 aa12.81□□□□□ -0.36
SDHD-209ENST00000640554 RELL2Q8NC24 303 aaPredicted RBP12.81□□□□□ -0.36
SDHD-209ENST00000640554 ZNF563Q8TA94 476 aa12.81□□□□□ -0.36
SDHD-209ENST00000640554 BBS10Q8TAM1 723 aa12.81□□□□□ -0.36
SDHD-209ENST00000640554 CPNE4Q96A23 557 aaPredicted RBP12.81□□□□□ -0.36
SDHD-209ENST00000640554 SPATA5L1Q9BVQ7 753 aa12.81□□□□□ -0.36
SDHD-209ENST00000640554 TMEM38AQ9H6F2 299 aa12.81□□□□□ -0.36
SDHD-209ENST00000640554 GP6Q9HCN6 339 aa12.81□□□□□ -0.36
SDHD-209ENST00000640554 NPDC1Q9NQX5 325 aaPredicted RBP12.81□□□□□ -0.36
SDHD-209ENST00000640554 SLC25A37Q9NYZ2 338 aa12.81□□□□□ -0.36
SDHD-209ENST00000640554 VAPAQ9P0L0 249 aa12.81□□□□□ -0.36
SDHD-209ENST00000640554 PACSIN3Q9UKS6 424 aa12.81□□□□□ -0.36
SDHD-209ENST00000640554 CENPVL1A0A0U1RR11 272 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 A0A1W2PNV4 684 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 CFAP73A6NFT4 308 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 H0YC42 278 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 IL11P20809 199 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 SLC7A1P30825 629 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 TPD52P55327 224 aaPredicted RBP12.8□□□□□ -0.36
SDHD-209ENST00000640554 RAC3P60763 192 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 SORDQ00796 357 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 RBBP4Q09028 425 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 MERTKQ12866 999 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 MAPK11Q15759 364 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 NDUFAF6Q330K2 333 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 TMEM176BQ3YBM2 270 aaPredicted RBP12.8□□□□□ -0.36
SDHD-209ENST00000640554 RUNDC3AQ59EK9 446 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 GCNT6Q5T4J0 391 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 RNF220Q5VTB9 566 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 REEP3Q6NUK4 255 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 PLEKHM3Q6ZWE6 761 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 FAM214BQ7L5A3 538 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 OLIG3Q7RTU3 272 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 MSRB3Q8IXL7 192 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 SLC43A2Q8N370 569 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 BHLHE22Q8NFJ8 381 aaPredicted RBP12.8□□□□□ -0.36
SDHD-209ENST00000640554 FNDC9Q8TBE3 224 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 FIG4Q92562 907 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 CNOT9Q92600 299 aaKnown RBP12.8□□□□□ -0.36
SDHD-209ENST00000640554 TMEM19Q96HH6 336 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 GMPPAQ96IJ6 420 aaPredicted RBP12.8□□□□□ -0.36
SDHD-209ENST00000640554 ZNF317Q96PQ6 595 aaPredicted RBP12.8□□□□□ -0.36
SDHD-209ENST00000640554 SH3GL1Q99961 368 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 TACO1Q9BSH4 297 aaKnown RBP12.8□□□□□ -0.36
SDHD-209ENST00000640554 SPATA9Q9BWV2 254 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 QRSL1Q9H0R6 528 aaKnown RBP12.8□□□□□ -0.36
SDHD-209ENST00000640554 EVA1AQ9H8M9 152 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 FANCFQ9NPI8 374 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 DNAJB12Q9NXW2 375 aaKnown RBP12.8□□□□□ -0.36
SDHD-209ENST00000640554 SLAMF8Q9P0V8 285 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.8□□□□□ -0.36
SDHD-209ENST00000640554 FREM3P0C091 2139 aa12.8□□□□□ -0.36
SDHD-209ENST00000640554 CDHR4A6H8M9 788 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 BBIP1A8MTZ0 92 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 A8MXE2 369 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 EEF1E1-BLOC1S5C9J1V9 151 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 TNFSF11O14788 317 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 EEF1E1O43324 174 aaKnown RBP12.79□□□□□ -0.36
SDHD-209ENST00000640554 EFNA2O43921 213 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 CXCL13O43927 109 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 TNFSF13O75888 250 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 PGM3O95394 542 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 ARAFP10398 606 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 CD8BP10966 210 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 SLC6A2P23975 617 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 UQCRC1P31930 480 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 RYKP34925 604 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 SFTPDP35247 375 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 SLC1A3P43003 542 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 RNF144AP50876 292 aaPredicted RBP12.79□□□□□ -0.36
SDHD-209ENST00000640554 CSNK2A1P68400 391 aaPredicted RBP12.79□□□□□ -0.36
SDHD-209ENST00000640554 FOXF2Q12947 444 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 CYLC2Q14093 348 aaPredicted RBP12.79□□□□□ -0.36
SDHD-209ENST00000640554 RNPS1Q15287 305 aaKnown RBP12.79□□□□□ -0.36
SDHD-209ENST00000640554 MRPL2Q5T653 305 aaKnown RBP12.79□□□□□ -0.36
SDHD-209ENST00000640554 DHDDSQ86SQ9 333 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 SLC30A8Q8IWU4 369 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 GCNT2Q8N0V5 402 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 STARD4Q96DR4 205 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 ZNF845Q96IR2 970 aaPredicted RBP12.79□□□□□ -0.36
SDHD-209ENST00000640554 ANKRD27Q96NW4 1050 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 ZNF607Q96SK3 696 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 CGREF1Q99674 301 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 NPAS1Q99742 590 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 KLHDC3Q9BQ90 382 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 SLC39A3Q9BRY0 314 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 TMEM185BQ9H7F4 350 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 EMC9Q9Y3B6 208 aa12.79□□□□□ -0.36
SDHD-209ENST00000640554 PRORSD1PA6NEY8 169 aa12.78□□□□□ -0.36
SDHD-209ENST00000640554 DNPH1O43598 174 aa12.78□□□□□ -0.36
SDHD-209ENST00000640554 CCDC22O60826 627 aa12.78□□□□□ -0.36
SDHD-209ENST00000640554 SERPINB7O75635 380 aa12.78□□□□□ -0.36
SDHD-209ENST00000640554 PLGP00747 810 aaPredicted RBP12.78□□□□□ -0.36
SDHD-209ENST00000640554 KIR2DL2P43627 348 aaPredicted RBP12.78□□□□□ -0.36
SDHD-209ENST00000640554 KIR2DL3P43628 341 aa12.78□□□□□ -0.36
SDHD-209ENST00000640554 IDH2P48735 452 aaKnown RBP12.78□□□□□ -0.36
SDHD-209ENST00000640554 CTBP2P56545 445 aa12.78□□□□□ -0.36
SDHD-209ENST00000640554 COPZ1P61923 177 aa12.78□□□□□ -0.36
SDHD-209ENST00000640554 CDK6Q00534 326 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms