RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-225	ENST00000617087	XCR1	P46094	333 aa		4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	RUNX3	Q13761	415 aa		4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	CTSL3P	Q5NE16	218 aa		4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	ZNF772	Q68DY9	489 aa	Predicted RBP	4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	DHDDS	Q86SQ9	333 aa		4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	CDR2L	Q86X02	465 aa	Predicted RBP	4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	POM121L12	Q8N7R1	296 aa		4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	MAPK1IP1L	Q8NDC0	245 aa		4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	FAF2	Q96CS3	445 aa		4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	C10orf35	Q96D05	121 aa		4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	COPS8	Q99627	209 aa		4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	NUDT15	Q9NV35	164 aa		4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	SUN2	Q9UH99	717 aa		4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	PRPF19	Q9UMS4	504 aa	Known RBP	4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	PDE10A	Q9Y233	779 aa		4.28	□□□□□ -1.72
PVT1-225	ENST00000617087	HCFC1	P51610	2035 aa		4.28	□□□□□ -1.73
PVT1-225	ENST00000617087	NCAPD3	P42695	1498 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	IGKV3D-15	A0A087WSY6	115 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087		A0A1B0GVL5	298 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	FRG2C	A6NGY1	282 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	SGK1	O00141	431 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	SULT2B1	O00204	365 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	CXCL13	O43927	109 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	GPX5	O75715	221 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	AP2A1	O95782	977 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	NDUFB10	O96000	172 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	GCA	P28676	217 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	SHC1	P29353	583 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	NMT1	P30419	496 aa	Known RBP	4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	MAP3K8	P41279	467 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	FNTA	P49354	379 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	HNRNPA3	P51991	378 aa	Known RBP	4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	IST1	P53990	364 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	RPL32	P62910	135 aa	Known RBP	4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	ZFP36L1	Q07352	338 aa	Known RBP	4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	CUL2	Q13617	745 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	SSX2	Q16385	188 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	GLYR1	Q49A26	553 aa	Predicted RBP	4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	SLC22A6	Q4U2R8	563 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	PRAMEF5	Q5TYX0	476 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	PRAMEF6	Q5VXH4	476 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	LIPN	Q5VXI9	398 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	OR2A2	Q6IF42	318 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	FAM228A	Q86W67	206 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	TRIM69	Q86WT6	500 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	SLC35F2	Q8IXU6	374 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	OR9K2	Q8NGE7	335 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	OR1L4	Q8NGR5	311 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	MAIP1	Q8WWC4	291 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	PSMG2	Q969U7	264 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	CNOT6L	Q96LI5	555 aa	Known RBP	4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	PLIN2	Q99541	437 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	MCHR1	Q99705	422 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	CHRDL1	Q9BU40	450 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	TSSK1B	Q9BXA7	367 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	ZNF385D	Q9H6B1	395 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	YY1AP1	Q9H869	796 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	POPDC2	Q9HBU9	364 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	DPM3	Q9P2X0	92 aa		4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	WARS2	Q9UGM6	360 aa	Known RBP	4.27	□□□□□ -1.73
PVT1-225	ENST00000617087	GOLGA8O	A6NCC3	632 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	GOLGA8N	F8WBI6	632 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	MED7	O43513	233 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	PRKY	O43930	277 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	RAMP3	O60896	148 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	ERLIN1	O75477	346 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	DIRAS1	O95057	198 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	SLC35E2	P0CK97	266 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	CCDC130	P13994	396 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	PGAM2	P15259	253 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	CAPN2	P17655	700 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	IL2RG	P31785	369 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	YWHAB	P31946	246 aa	Known RBP	4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	MAGEA9	P43362	315 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	RPL29	P47914	159 aa	Known RBP	4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	HLCS	P50747	726 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	PRKX	P51817	358 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	SUCLG1	P53597	346 aa	Known RBP	4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	ATP1B3	P54709	279 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	RPS14	P62263	151 aa	Known RBP	4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	C6orf226	Q5I0X4	101 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	NAXD	Q8IW45	347 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	OR2L13	Q8N349	312 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	SVOPL	Q8N434	492 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	FAM83F	Q8NEG4	500 aa	Predicted RBP	4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	CCDC26	Q8TAB7	109 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	SLC2A14	Q8TDB8	520 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	MRPS31	Q92665	395 aa	Known RBP	4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	UBE2E3	Q969T4	207 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	RASD2	Q96D21	266 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	C1orf147	Q96MC9	270 aa	Predicted RBP	4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	IL4I1	Q96RQ9	567 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	GPR61	Q9BZJ8	451 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	NANS	Q9NR45	359 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	CUTC	Q9NTM9	273 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	PAK5	Q9P286	719 aa		4.26	□□□□□ -1.73
PVT1-225	ENST00000617087	PHF11	Q9UIL8	331 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms