RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 RNFT2Q96EX2 444 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 PRRG3Q9BZD7 231 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 SLC7A5P2Q9GIP4 190 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 OR51E2Q9H255 320 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 UBQLN4Q9NRR5 601 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 DIMT1Q9UNQ2 313 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 ERGIC3Q9Y282 383 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 CARD8Q9Y2G2 431 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 PCDHGB2Q9Y5G2 931 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 TRAV27A0A087WT01 109 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 A0A1B0GVG6 124 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 C2orf92A0A1B0GVN3 265 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 EFCAB7A8K855 629 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 M0R3G1 203 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 BHLHE40O14503 412 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 UTS2O95399 124 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 SAGP10523 405 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 IMPDH2P12268 514 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 ETV5P41161 510 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 ETV1P50549 477 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 SSX1Q16384 188 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 ULK3Q6PHR2 472 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 DBX2Q6ZNG2 339 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 CDK20Q8IZL9 346 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 NANOGP1Q8N7R0 232 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 FAM71CQ8NEG0 241 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 OR14A16Q8NHC5 309 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 DAZLQ92904 295 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 PLEKHA8Q96JA3 519 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 OPALINQ96PE5 141 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 ADOQ96SZ5 270 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 OCEL1Q9H607 264 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 MRPS18AQ9NVS2 196 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 CFL2Q9Y281 166 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 TMEM5Q9Y2B1 443 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 PMF1-BGLAPU3KQ54 211 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 FAM186AA6NE01 2351 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 IGHV3-20A0A0C4DH32 117 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 PTP4A3O75365 173 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 RAB36O95755 333 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 HBQ1P09105 142 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 RBM34P42696 430 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 DBPQ10586 325 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 DCTN2Q13561 401 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 RNLSQ5VYX0 342 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 SHFQ7M4L6 423 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 SLCO6A1Q86UG4 719 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 ATCAYQ86WG3 371 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 CYP4Z2PQ8N1L4 340 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 PLPP5Q8NEB5 264 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 OR51A7Q8NH64 312 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 IFI44Q8TCB0 444 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 NAT6Q93015 286 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 TAPBPLQ9BX59 468 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 RNF167Q9H6Y7 350 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 ZBTB20Q9HC78 741 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 HINT3Q9NQE9 182 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 RPS6KB2Q9UBS0 482 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 SLC35A3Q9Y2D2 325 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 ZNF292O60281 2723 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 FAM183AA6NL82 134 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 SCRG1O75711 98 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 MTNR1AP48039 350 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 CLK1P49759 484 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 LIMK1P53667 647 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 FHL1Q13642 323 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 SPHARQ15513 63 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 SLC35F1Q5T1Q4 408 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 STPG1Q5TH74 334 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 C19orf48Q6RUI8 117 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 CBLN3Q6UW01 205 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 OR1N1Q8NGS0 311 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 ZNF524Q96C55 264 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 KLHDC3Q9BQ90 382 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 TEX12Q9BXU0 123 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 RTN4RQ9BZR6 473 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 TGIF2Q9GZN2 237 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 APMAPQ9HDC9 416 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 MED17Q9NVC6 651 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 PCDHGA3Q9Y5H0 932 aa15.63■□□□□ 0.09
SHKBP1-216ENST00000598201 IGLV3-12A0A075B6K2 115 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 ICOSLGO75144 302 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 HMGN1P05114 100 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 CD59P13987 128 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 SOX3P41225 446 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 BMXP51813 675 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 NR0B1P51843 470 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 CDH11P55287 796 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 CRYZQ08257 329 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 RAB40BQ12829 278 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 SKP2Q13309 424 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 NKAIN1Q4KMZ8 207 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 KLHL22Q53GT1 634 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 SMARCD3Q6STE5 483 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 CPOQ8IVL8 374 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 PROKR2Q8NFJ6 384 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 OR52L1Q8NGH7 329 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 PHOSPHO1Q8TCT1 267 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 ZHX1-C8orf76Q96EF9 292 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 TNFRSF13CQ96RJ3 184 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms