RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 DLX5P56178 289 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 RGS8P57771 180 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-220ENST00000588917 SESN3P58005 492 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 NCALDP61601 193 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 GABPB1Q06547 395 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-220ENST00000588917 TRIM25Q14258 630 aaKnown RBP17.71■□□□□ 0.43
CIRBP-220ENST00000588917 GLIPR1L2Q4G1C9 344 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 WBP2NLQ6ICG8 309 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 CBLL1Q75N03 491 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 GRINAQ7Z429 371 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 FAM156AQ8NDB6 213 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 MCUR1Q96AQ8 359 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 TIMP4Q99727 224 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 ARHGDIGQ99819 225 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 ZNF559Q9BR84 538 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 ACTR3BQ9P1U1 418 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 TESQ9UGI8 421 aaKnown RBP17.71■□□□□ 0.43
CIRBP-220ENST00000588917 PACSIN3Q9UKS6 424 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 ZNF835Q9Y2P0 537 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 SLC6A5Q9Y345 797 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 LIPGQ9Y5X9 500 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 USP9YO00507 2555 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-220ENST00000588917 GJE1A6NN92 205 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 NPIPA2E9PIF3 369 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 NPIPA3F8WFD2 350 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 FMO6PO60774 539 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 SERPINA1P01009 418 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 HOXD4P09016 255 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-220ENST00000588917 CPN1P15169 458 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 NCK1P16333 377 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 B3GALT5-AS1P59052 145 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 RAC1P63000 192 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 PLAURQ03405 335 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 TOMM34Q15785 309 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-220ENST00000588917 MTX3Q5HYI7 312 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 LSMEM1Q8N8F7 131 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 FAM57AQ8TBR7 257 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 TPD52L3Q96J77 140 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 NSMCE2Q96MF7 247 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 UGT2B28Q9BY64 529 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 TMEM27Q9HBJ8 222 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 DCAF13Q9NV06 445 aaKnown RBP17.7■□□□□ 0.42
CIRBP-220ENST00000588917 RPS6KB2Q9UBS0 482 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 SH3GLB1Q9Y371 365 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 ZNF337Q9Y3M9 751 aa17.7■□□□□ 0.42
CIRBP-220ENST00000588917 SPIN1Q9Y657 262 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-220ENST00000588917 AHRRA9YTQ3 701 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 AP3D1O14617 1153 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 SLC19A2O60779 497 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 NTN1O95631 604 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 ZNF682O95780 498 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 PSMA4P25789 261 aaKnown RBP17.69■□□□□ 0.42
CIRBP-220ENST00000588917 MSX2P35548 267 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-220ENST00000588917 CRYBA2P53672 197 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 HSF1Q00613 529 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 CRYZQ08257 329 aaKnown RBP17.69■□□□□ 0.42
CIRBP-220ENST00000588917 MERTKQ12866 999 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 TRAP1Q12931 704 aaKnown RBP17.69■□□□□ 0.42
CIRBP-220ENST00000588917 NRF1Q16656 503 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 GXYLT1Q4G148 440 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 Q6ZPB1 254 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-220ENST00000588917 FKBP9P1Q75LS8 142 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 DHFR2Q86XF0 187 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 GPR32P1Q8NGA4 272 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 RSPO3Q9BXY4 272 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-220ENST00000588917 ADAM19Q9H013 955 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 PCDHAC1Q9H158 963 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 SELENONQ9NZV5 590 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 SPRR3Q9UBC9 169 aa17.69■□□□□ 0.42
CIRBP-220ENST00000588917 ADAM11O75078 769 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 EPPINO95925 133 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 PRG2P13727 222 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 GABRA1P14867 456 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 POU3F2P20265 443 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-220ENST00000588917 TCEA1P23193 301 aaKnown RBP17.68■□□□□ 0.42
CIRBP-220ENST00000588917 IFNA8P32881 189 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 PTGER4P35408 488 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 POLR2HP52434 150 aaKnown RBP17.68■□□□□ 0.42
CIRBP-220ENST00000588917 FOXF1Q12946 379 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 PGM2L1Q6PCE3 622 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 PLEKHM3Q6ZWE6 761 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 CHERPQ8IWX8 916 aaKnown RBP17.68■□□□□ 0.42
CIRBP-220ENST00000588917 CADM2Q8N3J6 435 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 MEIOBQ8N635 442 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 POC1BQ8TC44 478 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 DNAJA4Q8WW22 397 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-220ENST00000588917 ASB9Q96DX5 294 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 POLR2J2Q9GZM3 115 aaKnown RBP17.68■□□□□ 0.42
CIRBP-220ENST00000588917 POLR2J3Q9H1A7 115 aaKnown RBP17.68■□□□□ 0.42
CIRBP-220ENST00000588917 LRMDAQ9H2I8 198 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 C12orf10Q9HB07 376 aa17.68■□□□□ 0.42
CIRBP-220ENST00000588917 USP9XQ93008 2570 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-220ENST00000588917 PRRC2CQ9Y520 2896 aaKnown RBP17.67■□□□□ 0.42
CIRBP-220ENST00000588917 FIGNL2A6NMB9 653 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 H3BML4 177 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 ARPC2O15144 300 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 FRS3O43559 492 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 WDR1O75083 606 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 TPOP07202 933 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 CXCR1P25024 350 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms