RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 QPRTQ15274 297 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 ZNF141Q15928 474 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 SMU1Q2TAY7 513 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 TIMM23BQ5SRD1 257 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 CEP85LQ5SZL2 805 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 IL23RQ5VWK5 629 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 ALKBH2Q6NS38 261 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 C3orf33Q6P1S2 294 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 CXXC5Q7LFL8 322 aaKnown RBP13.3□□□□□ -0.28
VAPA-209ENST00000585042 TMEM234Q8WY98 164 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 ZIM3Q96PE6 472 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 OR7D2Q96RA2 312 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 ING1Q9UK53 422 aaPredicted RBP13.3□□□□□ -0.28
VAPA-209ENST00000585042 ADAM21Q9UKJ8 722 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 LIPT1Q9Y234 373 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 NUP214P35658 2090 aaPredicted RBP13.3□□□□□ -0.28
VAPA-209ENST00000585042 DPRXA6NFQ7 191 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 SERINC4A6NH21 518 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 TMEM233B4DJY2 109 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 RNF223E7ERA6 249 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 CFLARO15519 480 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 SPAG7O75391 227 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 STX11O75558 287 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 PGM3O95394 542 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 C6orf47O95873 294 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 TP53P04637 393 aaPredicted RBP13.29□□□□□ -0.28
VAPA-209ENST00000585042 CSNK2A1P68400 391 aaPredicted RBP13.29□□□□□ -0.28
VAPA-209ENST00000585042 BSPH1Q075Z2 132 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 PTGR1Q14914 329 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 PPA1Q15181 289 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 TSC22D1Q15714 1073 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 NRF1Q16656 503 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 PGGHGQ32M88 737 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 ARHGAP11BQ3KRB8 267 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 SEZ6L2Q6UXD5 910 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 DNM1P46Q6ZS02 220 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 DTX2Q86UW9 622 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 FNDC5Q8NAU1 212 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 ATP6V1C2Q8NEY4 427 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 TCP10LQ8TDR4 215 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 SLC25A43Q8WUT9 341 aaPredicted RBP13.29□□□□□ -0.28
VAPA-209ENST00000585042 ZNF75CPQ92670 426 aaPredicted RBP13.29□□□□□ -0.28
VAPA-209ENST00000585042 DUSP26Q9BV47 211 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 SLCO5A1Q9H2Y9 848 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 CISD1Q9NZ45 108 aaKnown RBP13.29□□□□□ -0.28
VAPA-209ENST00000585042 COL6A5A8TX70 2615 aa13.29□□□□□ -0.28
VAPA-209ENST00000585042 IGKV3D-15A0A087WSY6 115 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 NPIPA5A0A0B4J1W7 369 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 A0A1W2PNR3 127 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 NPIPA7E9PJI5 369 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 SMAD9O15198 467 aaKnown RBP13.28□□□□□ -0.28
VAPA-209ENST00000585042 AGR2O95994 175 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 NPIPA8P0DM63 369 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 PGCP20142 388 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 COX5AP20674 150 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 MATN1P21941 496 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 APOBEC1P41238 236 aaKnown RBP13.28□□□□□ -0.28
VAPA-209ENST00000585042 CLK1P49759 484 aaKnown RBP13.28□□□□□ -0.28
VAPA-209ENST00000585042 CLDN8P56748 225 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 HBA1P69905 142 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 EMX2Q04743 252 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 SKP2Q13309 424 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 TIGD2Q4W5G0 525 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 PDZK1Q5T2W1 519 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 C1QTNF12Q5T7M4 302 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 TMPPEQ6ZT21 453 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 C6orf120Q7Z4R8 191 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 GALNT5Q7Z7M9 940 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 MTDHQ86UE4 582 aaKnown RBP13.28□□□□□ -0.28
VAPA-209ENST00000585042 ZNF614Q8N883 585 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 MIPOL1Q8TD10 442 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 C3orf30Q96M34 536 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 OR5B2Q96R09 309 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 TRAF4Q9BUZ4 470 aaPredicted RBP13.28□□□□□ -0.28
VAPA-209ENST00000585042 THUMPD3Q9BV44 507 aaKnown RBP13.28□□□□□ -0.28
VAPA-209ENST00000585042 ALG2Q9H553 416 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 SSU72Q9NP77 194 aaKnown RBP13.28□□□□□ -0.28
VAPA-209ENST00000585042 POLE3Q9NRF9 147 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 ACER3Q9NUN7 267 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 EXD2Q9NVH0 621 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 ASIC5Q9NY37 505 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 EMC3Q9P0I2 261 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 MGAT4BQ9UQ53 548 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 MAGED1Q9Y5V3 778 aaPredicted RBP13.28□□□□□ -0.28
VAPA-209ENST00000585042 CHD3Q12873 2000 aaKnown RBP13.28□□□□□ -0.28
VAPA-209ENST00000585042 FBN3Q75N90 2809 aa13.28□□□□□ -0.28
VAPA-209ENST00000585042 ATRQ13535 2644 aa13.27□□□□□ -0.28
VAPA-209ENST00000585042 OR5H1A6NKK0 313 aa13.27□□□□□ -0.29
VAPA-209ENST00000585042 SULT2B1O00204 365 aa13.27□□□□□ -0.29
VAPA-209ENST00000585042 RNASET2O00584 256 aaKnown RBP13.27□□□□□ -0.29
VAPA-209ENST00000585042 ANKRD28O15084 1053 aa13.27□□□□□ -0.29
VAPA-209ENST00000585042 DNPH1O43598 174 aa13.27□□□□□ -0.29
VAPA-209ENST00000585042 CSTAP01040 98 aa13.27□□□□□ -0.29
VAPA-209ENST00000585042 CD8AP01732 235 aa13.27□□□□□ -0.29
VAPA-209ENST00000585042 GGT1P19440 569 aa13.27□□□□□ -0.29
VAPA-209ENST00000585042 DIO1P49895 249 aa13.27□□□□□ -0.29
VAPA-209ENST00000585042 SESN3P58005 492 aa13.27□□□□□ -0.29
VAPA-209ENST00000585042 AGAP6Q5VW22 663 aa13.27□□□□□ -0.29
VAPA-209ENST00000585042 EIF3MQ7L2H7 374 aaKnown RBP13.27□□□□□ -0.29
VAPA-209ENST00000585042 ZNF100Q8IYN0 542 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms