RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ZNF563Q8TA94 476 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 NRGNQ92686 78 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 CPNE4Q96A23 557 aaPredicted RBP18.28■□□□□ 0.52
SS18-224ENST00000584083 DACH2Q96NX9 599 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 SLC38A1Q9H2H9 487 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 MTHFD2LQ9H903 347 aaPredicted RBP18.28■□□□□ 0.52
SS18-224ENST00000584083 TPT1P8Q9HAU6 139 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 SERINC1Q9NRX5 453 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 GLRX2Q9NS18 164 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 CCDC168Q8NDH2 2452 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 CLDN24A6NM45 220 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 CASKO14936 926 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 DNAJA2O60884 412 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 SS18L1O75177 396 aaPredicted RBP18.27■□□□□ 0.52
SS18-224ENST00000584083 BCAS1O75363 584 aaPredicted RBP18.27■□□□□ 0.52
SS18-224ENST00000584083 PABPC4LP0CB38 370 aaKnown RBP18.27■□□□□ 0.52
SS18-224ENST00000584083 ETFAP13804 333 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 POU2F1P14859 743 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 MAGEA8P43361 318 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 MERTKQ12866 999 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 GTDC1Q4AE62 458 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 FAM71CQ8NEG0 241 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 OR6K3Q8NGY3 331 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 CKAP2Q8WWK9 683 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 AURKBQ96GD4 344 aaPredicted RBP18.27■□□□□ 0.52
SS18-224ENST00000584083 MAGEB18Q96M61 343 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 SRXN1Q9BYN0 137 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 ACER3Q9NUN7 267 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 ELOVL5Q9NYP7 299 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 P2RX2Q9UBL9 471 aa18.27■□□□□ 0.52
SS18-224ENST00000584083 AKAP6Q13023 2319 aa18.27■□□□□ 0.51
SS18-224ENST00000584083 A0A1W2PNR3 127 aa18.26■□□□□ 0.51
SS18-224ENST00000584083 FAM221AA4D161 298 aa18.26■□□□□ 0.51
SS18-224ENST00000584083 AGAP5A6NIR3 686 aa18.26■□□□□ 0.51
SS18-224ENST00000584083 DSTNP60981 165 aa18.26■□□□□ 0.51
SS18-224ENST00000584083 GNA13Q14344 377 aa18.26■□□□□ 0.51
SS18-224ENST00000584083 ZNF239Q16600 458 aaKnown RBP18.26■□□□□ 0.51
SS18-224ENST00000584083 EXOC3L2Q2M3D2 409 aa18.26■□□□□ 0.51
SS18-224ENST00000584083 C3orf33Q6P1S2 294 aa18.26■□□□□ 0.51
SS18-224ENST00000584083 SLC2A7Q6PXP3 512 aa18.26■□□□□ 0.51
SS18-224ENST00000584083 WDR60Q8WVS4 1066 aa18.26■□□□□ 0.51
SS18-224ENST00000584083 CNOT9Q92600 299 aaKnown RBP18.26■□□□□ 0.51
SS18-224ENST00000584083 OR5B2Q96R09 309 aa18.26■□□□□ 0.51
SS18-224ENST00000584083 PLSCR4Q9NRQ2 329 aa18.26■□□□□ 0.51
SS18-224ENST00000584083 CCDC167Q9P0B6 97 aa18.26■□□□□ 0.51
SS18-224ENST00000584083 CSMD2Q7Z408 3487 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 ABCA4P78363 2273 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 ETV2O00321 342 aaPredicted RBP18.25■□□□□ 0.51
SS18-224ENST00000584083 NR5A2O00482 541 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 SASH3O75995 380 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 DBIP07108 87 aaKnown RBP18.25■□□□□ 0.51
SS18-224ENST00000584083 IL7RP16871 459 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 MRPL19P49406 292 aaKnown RBP18.25■□□□□ 0.51
SS18-224ENST00000584083 PCYT1AP49585 367 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 MVDP53602 400 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 PLEKHM3Q6ZWE6 761 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 CDC20BQ86Y33 519 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 CMIPQ8IY22 773 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 PEX5LQ8IYB4 626 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 ABHD3Q8WU67 409 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 GTF2H4Q92759 462 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 PMM1Q92871 262 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 THOC1Q96FV9 657 aaKnown RBP18.25■□□□□ 0.51
SS18-224ENST00000584083 COQ10BQ9H8M1 238 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 EXOSC3Q9NQT5 275 aaKnown RBP18.25■□□□□ 0.51
SS18-224ENST00000584083 CALML5Q9NZT1 146 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 OTOGQ6ZRI0 2925 aa18.25■□□□□ 0.51
SS18-224ENST00000584083 TMEM247A6NEH6 219 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 C16orf97H3BN30 126 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 BCHEP06276 602 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 TFPIP10646 304 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 DNAJA1P31689 397 aaKnown RBP18.24■□□□□ 0.51
SS18-224ENST00000584083 UGT2B10P36537 528 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 RNPS1Q15287 305 aaKnown RBP18.24■□□□□ 0.51
SS18-224ENST00000584083 TMEM201Q5SNT2 666 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 FCRLAQ7L513 359 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 STK32CQ86UX6 486 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 FUNDC1Q8IVP5 155 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 RNF128Q8TEB7 428 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 SPDL1Q96EA4 605 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 MED18Q9BUE0 208 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 KLHL4Q9C0H6 718 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 PAIP1Q9H074 479 aaKnown RBP18.24■□□□□ 0.51
SS18-224ENST00000584083 C12orf49Q9H741 205 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 KLHL28Q9NXS3 571 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 TESMINQ9Y4I5 508 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 PCDHB14Q9Y5E9 798 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 CSMD1Q96PZ7 3565 aa18.24■□□□□ 0.51
SS18-224ENST00000584083 A0A096LPI6 279 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 IGHV3-15A0A0B4J1V0 119 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 CLIC1O00299 241 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 PRKD3O94806 890 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 TFPTP0C1Z6 253 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 AGTR1P30556 359 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 APOBEC1P41238 236 aaKnown RBP18.23■□□□□ 0.51
SS18-224ENST00000584083 IDH2P48735 452 aaKnown RBP18.23■□□□□ 0.51
SS18-224ENST00000584083 CRISP3P54108 245 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 RAC3P60763 192 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 POU4F3Q15319 338 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 AGKQ53H12 422 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms