RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	SMIM10	Q96HG1	83 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	OXNAD1	Q96HP4	312 aa	Predicted RBP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	APOPT1	Q96IL0	206 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	DNAJC1	Q96KC8	554 aa	Known RBP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	ZNF570	Q96NI8	536 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	ANKRD27	Q96NW4	1050 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	QKI	Q96PU8	341 aa	Known RBP eCLIP	4.09	□□□□□ -1.75	3e-7	■■■■■ 35.8
MSI2-216	ENST00000582772	SPATA25	Q9BR10	227 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	TBCD	Q9BTW9	1192 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	MECR	Q9BV79	373 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	LRMDA	Q9H2I8	198 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	SEBOX	Q9HB31	216 aa	Predicted RBP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	ZBTB26	Q9HCK0	441 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	GALNT9	Q9HCQ5	603 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	PAK5	Q9P286	719 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	KLHL14	Q9P2G3	628 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	SLC17A6	Q9P2U8	582 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	FKBPL	Q9UIM3	349 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	HAO1	Q9UJM8	370 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	DKKL1	Q9UK85	242 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	MRPS33	Q9Y291	106 aa	Known RBP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	STK38L	Q9Y2H1	464 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	AMDHD2	Q9Y303	409 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	DTNA	Q9Y4J8	743 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	HEY1	Q9Y5J3	304 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	FAT3	Q8TDW7	4589 aa		4.09	□□□□□ -1.76
MSI2-216	ENST00000582772	KRT87P	A6NCN2	255 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	NUPR2	A6NF83	97 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	ZNF487	B1APH4	448 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772		H7BY64	318 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772		M0R233	179 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	ADAMDEC1	O15204	470 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	RTL8C	O15255	209 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	TM9SF1	O15321	606 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	BUD23	O43709	281 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	MFSD11	O43934	449 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	LCMT2	O60294	686 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	CCNT2	O60583	730 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	DNAJA2	O60884	412 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	CTNS	O60931	367 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	RAD51D	O75771	328 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	ANP32D	O95626	131 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	B3GALT4	O96024	378 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	SNRPA	P09012	282 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	VSIG10L2	P0DP72	767 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	GNAZ	P19086	355 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	PRPH2	P23942	346 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	HSD17B2	P37059	387 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	BUD31	P41223	144 aa	Predicted RBP	4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	EIF1AX	P47813	144 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	SERPINB4	P48594	390 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	MMP15	P51511	669 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	CD83	Q01151	205 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	PTPRCAP	Q14761	206 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	DPYSL2	Q16555	572 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	PARP6	Q2NL67	630 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	BOLA3	Q53S33	107 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	STEAP4	Q687X5	459 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	LRRN1	Q6UXK5	716 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	SLC29A4	Q7RTT9	530 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	LRRC70	Q7Z2Q7	622 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	C5orf24	Q7Z6I8	188 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	CLNK	Q7Z7G1	428 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	MTDH	Q86UE4	582 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	NUDT13	Q86X67	352 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	VSIG1	Q86XK7	387 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	GPATCH11	Q8N954	259 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	WDR31	Q8NA23	367 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	RBM15B	Q8NDT2	890 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	OR4F15	Q8NGB8	312 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	OR4C13	Q8NGP0	309 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	OR10D3	Q8NH80	312 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	NT5C	Q8TCD5	201 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	UTP15	Q8TED0	518 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	RAB8B	Q92930	207 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	HGD	Q93099	445 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	ZNF778	Q96MU6	729 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	PRAP1	Q96NZ9	151 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	OLFM3	Q96PB7	478 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	RBBP8	Q99708	897 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	GORASP1	Q9BQQ3	440 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	ZNF670	Q9BS34	389 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	NPL	Q9BXD5	320 aa	Predicted RBP	4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	TMEM120A	Q9BXJ8	343 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	CADM1	Q9BY67	442 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	C20orf27	Q9GZN8	174 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	SLC25A51	Q9H1U9	297 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	VPS11	Q9H270	941 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	FBXO6	Q9NRD1	293 aa	Predicted RBP	4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	MKS1	Q9NXB0	559 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	DCTN4	Q9UJW0	460 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	ZNF180	Q9UJW8	692 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	EMCN	Q9ULC0	261 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	PLLP	Q9Y342	182 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	PRSS21	Q9Y6M0	314 aa		4.08	□□□□□ -1.76
MSI2-216	ENST00000582772	TNXB	P22105	4242 aa		4.07	□□□□□ -1.76
MSI2-216	ENST00000582772	IQANK1	A0A1B0GTG1	560 aa		4.07	□□□□□ -1.76
MSI2-216	ENST00000582772	OR2M5	A3KFT3	312 aa		4.07	□□□□□ -1.76
MSI2-216	ENST00000582772	VSTM5	A8MXK1	200 aa		4.07	□□□□□ -1.76
MSI2-216	ENST00000582772		H7C0S8	307 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms