RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 OR2T4Q8NH00 348 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 CPNE2Q96FN4 548 aaPredicted RBP11.23□□□□□ -0.61
ERBB2-206ENST00000578373 PDCD1LG2Q9BQ51 273 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 PLSCR3Q9NRY6 295 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 ACSS1Q9NUB1 689 aaPredicted RBP11.23□□□□□ -0.61
ERBB2-206ENST00000578373 SPATA6Q9NWH7 488 aaPredicted RBP11.23□□□□□ -0.61
ERBB2-206ENST00000578373 SLC23A2Q9UGH3 650 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 DOCK3Q8IZD9 2030 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 SLC5A10A0PJK1 596 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 TMEM72A0PK05 275 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 DISC1C4P0D8 188 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 FZD7O75084 574 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 TRAPPC6AO75865 159 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 MYOGP15173 224 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 ARSBP15848 533 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 DNM1P34Q6PK57 102 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 FRMD1Q8N878 549 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 SYNPRQ8TBG9 265 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 TSNAXQ99598 290 aaKnown RBP11.23□□□□□ -0.61
ERBB2-206ENST00000578373 POTEKPQ9BYX7 375 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 MBNL1Q9NR56 388 aaKnown RBP11.23□□□□□ -0.61
ERBB2-206ENST00000578373 RBFOX1Q9NWB1 397 aaKnown RBP11.23□□□□□ -0.61
ERBB2-206ENST00000578373 CENPBD1B2RD01 187 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 H0YGG7 62 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 LCMT2O60294 686 aaKnown RBP11.23□□□□□ -0.61
ERBB2-206ENST00000578373 RFPL3O75679 317 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 SULT1C4O75897 302 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 HRGP04196 525 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 SOX18P35713 384 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 ARF3P61204 181 aaPredicted RBP11.23□□□□□ -0.61
ERBB2-206ENST00000578373 RPE65Q16518 533 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 RNASE10Q5GAN6 216 aaKnown RBP11.23□□□□□ -0.61
ERBB2-206ENST00000578373 RASGRP3Q8IV61 690 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 NMNAT3Q96T66 252 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 MBD1Q9UIS9 605 aaPredicted RBP11.23□□□□□ -0.61
ERBB2-206ENST00000578373 ZDBF2Q9HCK1 2354 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 CCDC88CQ9P219 2028 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 ARFGEF1Q9Y6D6 1849 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 POLR1CO15160 346 aaPredicted RBP11.23□□□□□ -0.61
ERBB2-206ENST00000578373 LRRTM2O43300 516 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 CRYZL1O95825 349 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 CPMP14384 443 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 GRK5P34947 590 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 FAM26DQ5JW98 314 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 SLX4IPQ5VYV7 408 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 ZNF322Q6U7Q0 402 aaPredicted RBP11.23□□□□□ -0.61
ERBB2-206ENST00000578373 APOOLQ6UXV4 268 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 UBQLNLQ8IYU4 475 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 ARL14Q8N4G2 192 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 UBQLN3Q9H347 655 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 SERTAD3Q9UJW9 196 aa11.23□□□□□ -0.61
ERBB2-206ENST00000578373 POLR2AP24928 1970 aaKnown RBP11.23□□□□□ -0.61
ERBB2-206ENST00000578373 H0Y8X5 98 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 RFXAPO00287 272 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 FZD6O60353 706 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 TIMP1P01033 207 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 PRR35P0CG20 571 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 CD22P20273 847 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 GABRA5P31644 462 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 PRSS3P35030 304 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 BCL6P41182 706 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 EMP3P54852 163 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 ARHGAP19Q14CB8 494 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 TRAM1Q15629 374 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 TRMT12Q53H54 448 aaKnown RBP11.22□□□□□ -0.61
ERBB2-206ENST00000578373 EOGTQ5NDL2 527 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 FAM27D1Q5T7N8 215 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 SLC22A10Q63ZE4 541 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 OR7E24Q6IFN5 339 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 ALKAL2Q6UX46 152 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 CD300LGQ6UXG3 332 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 CD163Q86VB7 1156 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 C15orf40Q8WUR7 153 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 GAL3ST3Q96A11 431 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 ORAI1Q96D31 301 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 NXPE2Q96DL1 559 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 OR14A2Q96R54 314 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 ZDHHC5Q9C0B5 715 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 HHATLQ9HCP6 504 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 C1GALT1Q9NS00 363 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 SEMA4GQ9NTN9 838 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 CDHR4A6H8M9 788 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 AGPAT2O15120 278 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 C1QCP02747 245 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 CCR2P41597 374 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 OR1D4P47884 311 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 AIMP2Q13155 320 aaKnown RBP11.22□□□□□ -0.61
ERBB2-206ENST00000578373 ZNF767PQ75MW2 155 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 TMEM17Q86X19 198 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 PATE1Q8WXA2 126 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 PKMYT1Q99640 499 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 KATNB1Q9BVA0 655 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 ACTR6Q9GZN1 396 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 PRSS16Q9NQE7 514 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 SPHK1Q9NYA1 384 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 PAPPAQ13219 1627 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 HRO43593 1189 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 RPS27P42677 84 aaKnown RBP11.22□□□□□ -0.61
ERBB2-206ENST00000578373 RIDAP52758 137 aaKnown RBP11.22□□□□□ -0.61
ERBB2-206ENST00000578373 BAK1Q16611 211 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms