RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SRRQ9GZT4 340 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 HIDE1A8MVS5 230 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 AHSA1O95433 338 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 GALK2Q01415 458 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 GLT8D1Q68CQ7 371 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 FAAP20Q6NZ36 180 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 PLA2G15Q8NCC3 412 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 C15orf40Q8WUR7 153 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 HAVCR1Q96D42 359 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 EPHA6Q9UF33 1036 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 DHDHQ9UQ10 334 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 HMGN4O00479 90 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 VASPP50552 380 aaPredicted RBP16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 ESCO2Q56NI9 601 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 RNASE10Q5GAN6 216 aaKnown RBP16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 CPXM2Q8N436 756 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 OR2AJ1Q8NGZ0 328 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 OR6F1Q8NGZ6 308 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 CLEC3AO75596 197 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 HSD11B1P28845 292 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 MLLT3P42568 568 aaPredicted RBP16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 WNT3P56703 355 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 TMEM185AQ8NFB2 350 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 PITX2Q99697 317 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 NRTNQ99748 197 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 ZNF700Q9H0M5 742 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 GABARAPL1Q9H0R8 117 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 STRCP1A6NGW2 1772 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 CTSAP10619 480 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 MAOBP27338 520 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 UBE2MP61081 183 aaKnown RBP16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 RPS21P63220 83 aaKnown RBP16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 TCTE1Q5JU00 501 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 HBMQ6B0K9 141 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 TMEM99Q8N816 258 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 SLC25A44Q96H78 314 aaPredicted RBP16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 PELI2Q9HAT8 420 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 ASF1BQ9NVP2 202 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 TMEM72A0PK05 275 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 FZD6O60353 706 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 SLC43A1O75387 559 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 CEBPBP17676 345 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 GZMKP49863 264 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 OPCMLQ14982 345 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 RPL13AP3Q6NVV1 102 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 ARSKQ6UWY0 536 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 FAM83HQ6ZRV2 1179 aaPredicted RBP16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 ACSS1Q9NUB1 689 aaPredicted RBP16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 V9GY05 133 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 PTPRFP10586 1907 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 CEP250Q9BV73 2442 aa16.68■□□□□ 0.26
ATPAF1-214ENST00000576409 A0A0A6YYC8 382 aaPredicted RBP16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 CDC14CA4D256 554 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 H3BNC9 293 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 I3L1I5 382 aaPredicted RBP16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 YY2O15391 372 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 DCST2Q5T1A1 773 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 YOD1Q5VVQ6 348 aaPredicted RBP16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 C7orf61Q8IZ16 206 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 ARRDC3Q96B67 414 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 NMNAT3Q96T66 252 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 FLVCR2Q9UPI3 526 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 NPIPA5E9PKD4 350 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 RAB3DO95716 219 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 GP1BBP13224 206 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 PSMB1P20618 241 aaKnown RBP16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 ATP5A1P25705 553 aaKnown RBP16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 SNRPGP62308 76 aaKnown RBP16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 DGCR2P98153 550 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 SORDQ00796 357 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 SSX1Q16384 188 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 CCDC190Q86UF4 302 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 TRMT2BQ96GJ1 504 aaKnown RBP16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 DHRS1Q96LJ7 313 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 NPIPA1Q9UND3 350 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 ZNF443Q9Y2A4 671 aaPredicted RBP16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 SLC35A3Q9Y2D2 325 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 PRKNO60260 465 aaPredicted RBP16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 OPN1LWP04000 364 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 DCNP07585 359 aaKnown RBP16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 HBQ1P09105 142 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 SLC35D2Q76EJ3 337 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 CD300LFQ8TDQ1 290 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 SAMD11Q96NU1 681 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 PKMYT1Q99640 499 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 PLA2G12AQ9BZM1 189 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 MAFFQ9ULX9 164 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 TRDV1A0A1B0GX56 115 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 RBMXL2O75526 392 aaKnown RBP16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 SC5DO75845 299 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 ZDHHC11BP0C7U3 371 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 SLC7A9P82251 487 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 HTRA3P83110 453 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 ASAH1Q13510 395 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 ZNF322Q6U7Q0 402 aaPredicted RBP16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 USP53Q70EK8 1073 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 DGLUCYQ7Z3D6 616 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 NLRP8Q86W28 1048 aa16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 LRRC56Q8IYG6 542 aaPredicted RBP16.67■□□□□ 0.26
ATPAF1-214ENST00000576409 STOML3Q8TAV4 291 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms