RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 HELZ2Q9BYK8 2649 aaKnown RBP11.53□□□□□ -0.56
CDT1-203ENST00000569140 CDHR4A6H8M9 788 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 PRORSD1PA6NEY8 169 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 FXYD1O00168 92 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 FRS3O43559 492 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 CXCL13O43927 109 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 DCTN3O75935 186 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 NPPAP01160 153 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 OPN1SWP03999 348 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 TMIGD3P0DMS9 266 aaPredicted RBP11.53□□□□□ -0.56
CDT1-203ENST00000569140 ETS2P15036 469 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 AGAP20933 346 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 BMP5P22003 454 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 COL8A1P27658 744 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 ADH6P28332 368 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 HTR1EP28566 365 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 SHC1P29353 583 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 TIMP3P35625 211 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 CPA2P48052 419 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 NCALDP61601 193 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 COPZ1P61923 177 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 EEF1A1P68104 462 aaKnown RBP11.53□□□□□ -0.56
CDT1-203ENST00000569140 PLAURQ03405 335 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 CDSNQ15517 529 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 TMEM176BQ3YBM2 270 aaPredicted RBP11.53□□□□□ -0.56
CDT1-203ENST00000569140 GKAP1Q5VSY0 366 aaPredicted RBP11.53□□□□□ -0.56
CDT1-203ENST00000569140 RNF220Q5VTB9 566 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 HIST2H2BCQ6DN03 193 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 C3orf33Q6P1S2 294 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 PLEKHM3Q6ZWE6 761 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 ZNF550Q7Z398 422 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 SERPINA11Q86U17 422 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 GGNQ86UU5 652 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 PTOV1Q86YD1 416 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 ARMC8Q8IUR7 673 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 SLC30A8Q8IWU4 369 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 CLIP4Q8N3C7 705 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 NAXEQ8NCW5 288 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 OR10D3Q8NH80 312 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 OR2V1Q8NHB1 315 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 WNT2BQ93097 391 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 ZNF524Q96C55 264 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 INTS12Q96CB8 462 aaKnown RBP11.53□□□□□ -0.56
CDT1-203ENST00000569140 DNAJA3Q96EY1 480 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 REXO5Q96IC2 774 aaKnown RBP11.53□□□□□ -0.56
CDT1-203ENST00000569140 OR5B2Q96R09 309 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 CCT8L2Q96SF2 557 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 UCK2Q9BZX2 261 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 KAT8Q9H7Z6 458 aaKnown RBP11.53□□□□□ -0.56
CDT1-203ENST00000569140 CTPS2Q9NRF8 586 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 ACER3Q9NUN7 267 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 CLCF1Q9UBD9 225 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 MCTS1Q9ULC4 181 aaKnown RBP11.53□□□□□ -0.56
CDT1-203ENST00000569140 SPIN1Q9Y657 262 aaPredicted RBP11.53□□□□□ -0.56
CDT1-203ENST00000569140 GMEB1Q9Y692 573 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 PCNX3Q9H6A9 2034 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 MYO18BQ8IUG5 2567 aa11.53□□□□□ -0.56
CDT1-203ENST00000569140 PHF3Q92576 2039 aaKnown RBP11.52□□□□□ -0.56
CDT1-203ENST00000569140 A0A0J9YW62 118 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 A0A1W2PNR3 127 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 MBD3L4A6NDZ8 208 aaPredicted RBP11.52□□□□□ -0.57
CDT1-203ENST00000569140 MBD3L3A6NE82 208 aaPredicted RBP11.52□□□□□ -0.57
CDT1-203ENST00000569140 MBD3L5A6NJ08 208 aaPredicted RBP11.52□□□□□ -0.57
CDT1-203ENST00000569140 EEF1E1-BLOC1S5C9J1V9 151 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 DVL2O14641 736 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 EEF1E1O43324 174 aaKnown RBP11.52□□□□□ -0.57
CDT1-203ENST00000569140 ADAM11O75078 769 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 TOXO94900 526 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 TGM6O95932 706 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 PLGP00747 810 aaPredicted RBP11.52□□□□□ -0.57
CDT1-203ENST00000569140 PSMA4P25789 261 aaKnown RBP11.52□□□□□ -0.57
CDT1-203ENST00000569140 CARD18P57730 90 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 SIRPAP78324 504 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 MXRA7P84157 204 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 HOXC5Q00444 222 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 RBBP4Q09028 425 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 EPS8Q12929 822 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 ADRM1Q16186 407 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 VMACQ2NL98 169 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 INTS11Q5TA45 600 aaKnown RBP11.52□□□□□ -0.57
CDT1-203ENST00000569140 ESPNLQ6ZVH7 1005 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 GRINAQ7Z429 371 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 MCEMP1Q8IX19 187 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 CNEP1R1Q8N9A8 125 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 SMYD1Q8NB12 490 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 MBD3L2Q8NHZ7 208 aaPredicted RBP11.52□□□□□ -0.57
CDT1-203ENST00000569140 FNDC9Q8TBE3 224 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 RNF217Q8TC41 542 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 FIG4Q92562 907 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 LRRC37BQ96QE4 947 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 MYLK2Q9H1R3 596 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 EFCAB1Q9HAE3 211 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 KCNJ16Q9NPI9 418 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 TIGARQ9NQ88 270 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 PAQR5Q9NXK6 330 aaPredicted RBP11.52□□□□□ -0.57
CDT1-203ENST00000569140 KLHL28Q9NXS3 571 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 RPS6KB2Q9UBS0 482 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 RP1L1Q8IWN7 2480 aaPredicted RBP11.52□□□□□ -0.57
CDT1-203ENST00000569140 ARHGAP21Q5T5U3 1957 aa11.52□□□□□ -0.57
CDT1-203ENST00000569140 KIAA1549Q9HCM3 1950 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms