RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 MED8Q96G25 268 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 ART5Q96L15 291 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 MTERF1Q99551 399 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 RDH14Q9HBH5 336 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 BARX1Q9HBU1 254 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 RCE1Q9Y256 329 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 CHST10O43529 356 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 PIP5K1CO60331 668 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 NME6O75414 186 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 AQP8O94778 261 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 FGF19O95750 216 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 H1F0P07305 194 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 IFNGR1P15260 489 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 FPR3P25089 353 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 GDNFP39905 211 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 PITPNAQ00169 270 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 EEF1A2Q05639 463 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 ACSM2AQ08AH3 577 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 DYRK1AQ13627 763 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 SLC25A35Q3KQZ1 300 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 ACSM2BQ68CK6 577 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 ZNF425Q6IV72 752 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 SLC36A4Q6YBV0 504 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 GLDNQ6ZMI3 551 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 RBM45Q8IUH3 476 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 GPR156Q8NFN8 814 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 OR52N2Q8NGI0 321 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 SLC7A13Q8TCU3 470 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 FGF11Q92914 225 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 RBM14Q96PK6 669 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 OR1F2PQ96R84 312 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 ENKD1Q9H0I2 346 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 IGFLR1Q9H665 355 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 OR10H1Q9Y4A9 318 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 MEX3AA1L020 520 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 CREBL2O60519 120 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 PRF1P14222 555 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 ANXA7P20073 488 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 PAICSP22234 425 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 GPR143P51810 404 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 UBE2IP63279 158 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 MAT1AQ00266 395 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 TMEM115Q12893 351 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 MINDY4Q4G0A6 757 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 FNDC3BQ53EP0 1204 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 DHRS7BQ6IAN0 325 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 TCTN3Q6NUS6 607 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 TMEM220Q6QAJ8 160 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 IZUMO1Q8IYV9 350 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 KLHL36Q8N4N3 616 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 GANCQ8TET4 914 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 GINS4Q9BRT9 223 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 MVB12BQ9H7P6 319 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 KLHL1Q9NR64 748 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 DHCR7Q9UBM7 475 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 VPS29Q9UBQ0 182 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 NUMA1Q14980 2115 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 A0A1W2PRB8 838 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 EPHX1P07099 455 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 HNRNPA1P09651 372 aaKnown RBP eCLIP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 CPN1P15169 458 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 ZNF3P17036 446 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 IDSP22304 550 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 EFNB1P98172 346 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 CHIT1Q13231 466 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 GPM6BQ13491 265 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 C18orf63Q68DL7 685 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 TMIEQ8NEW7 156 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 VN1R2Q8NFZ6 395 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 RGMAQ96B86 450 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 WDR77Q9BQA1 342 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 TMEM38AQ9H6F2 299 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 GHRLQ9UBU3 117 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 ANGPT4Q9Y264 503 aa13.03□□□□□ -0.32
GTF3C1-203ENST00000562609 PGRMC2O15173 223 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 RNF13O43567 381 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 LCMT2O60294 686 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 C6orf47O95873 294 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 CNR1P21554 472 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 PBX2P40425 430 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 MAPK9P45984 424 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 CCR9P51686 369 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 PCBP3P57721 371 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 LSM11P83369 360 aaKnown RBP eCLIP13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 ZNF630Q2M218 657 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 GGTA1PQ4G0N0 100 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 RPS26P11Q5JNZ5 115 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 TRIM40Q6P9F5 258 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 SMARCD3Q6STE5 483 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 MEX3DQ86XN8 651 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 HORMAD2Q8N7B1 307 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 FGF13Q92913 245 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 GLYATL1Q969I3 302 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 TEFMQ96QE5 360 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 SMAD5Q99717 465 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 C19orf43Q9BQ61 176 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 HRASLSQ9HDD0 168 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 ZNF275Q9NSD4 429 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 ZFP57Q9NU63 452 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 MARK1Q9P0L2 795 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms