RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ATP1B1P05026 303 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 CLTBP09497 229 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 TIMP2P16035 220 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 MAT2AP31153 395 aaKnown RBP15.3■□□□□ 0.04
TPM1-228ENST00000560975 TAS2R38P59533 333 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 TGM3Q08188 693 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 DECR1Q16698 335 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 MBOAT2Q6ZWT7 520 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 HIST3H2AQ7L7L0 130 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 OR6V1Q8N148 313 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 ZNF433Q8N7K0 673 aaPredicted RBP15.3■□□□□ 0.04
TPM1-228ENST00000560975 BOLLQ8N9W6 283 aaKnown RBP15.3■□□□□ 0.04
TPM1-228ENST00000560975 HIST1H2ACQ93077 130 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 ZNF707Q96C28 371 aaPredicted RBP15.3■□□□□ 0.04
TPM1-228ENST00000560975 TEAD3Q99594 435 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 ARHGDIGQ99819 225 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 SLC25A18Q9H1K4 315 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 MRTO4Q9UKD2 239 aaKnown RBP15.3■□□□□ 0.04
TPM1-228ENST00000560975 K7ESM1 405 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 NDUFS4O43181 175 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 OR1F1O43749 312 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 KCNJ13O60928 360 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 CYBAP13498 195 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 ZNF35P13682 527 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 SSR2P43308 183 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 ERVK-25P63136 954 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 TRAM1Q15629 374 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 ZNF461Q8TAF7 563 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 THEM6Q8WUY1 208 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 ASB12Q8WXK4 309 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 PEX11GQ96HA9 241 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 C12orf57Q99622 126 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 EXOSC3Q9NQT5 275 aaKnown RBP15.29■□□□□ 0.04
TPM1-228ENST00000560975 MED11Q9P086 117 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 LINC01387J3KSC0 135 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 KLF4O43474 513 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 KRT33AO76009 404 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 RLN2P04090 185 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 TEAD1P28347 426 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 NTSP30990 170 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 NRG3P56975 720 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 FLI1Q01543 452 aaPredicted RBP15.29■□□□□ 0.04
TPM1-228ENST00000560975 FAM74A1Q5RGS3 127 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 C9orf64Q5T6V5 341 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 ZNF660Q6AZW8 331 aaPredicted RBP15.29■□□□□ 0.04
TPM1-228ENST00000560975 UBE3DQ7Z6J8 389 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 ARL14Q8N4G2 192 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 OR52L1Q8NGH7 329 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 SMPDL3BQ92485 455 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 OR7D2Q96RA2 312 aa15.29■□□□□ 0.04
TPM1-228ENST00000560975 LAMA2P24043 3122 aaKnown RBP15.28■□□□□ 0.04
TPM1-228ENST00000560975 TBX19O60806 448 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 ELFN1P0C7U0 828 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 MAGEB1P43366 347 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 FXYD6P3P58550 94 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 LGALS3BPQ08380 585 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 UBE2NLQ5JXB2 153 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 DMKNQ6E0U4 476 aaPredicted RBP15.28■□□□□ 0.04
TPM1-228ENST00000560975 PFN4Q8NHR9 129 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 AIF1LQ9BQI0 150 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 IFT22Q9H7X7 185 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 GPN1Q9HCN4 374 aaPredicted RBP15.28■□□□□ 0.04
TPM1-228ENST00000560975 KLHL28Q9NXS3 571 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 KLHL9Q9P2J3 617 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 ZMAT5Q9UDW3 170 aaKnown RBP15.28■□□□□ 0.04
TPM1-228ENST00000560975 UNC119BA6NIH7 251 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 SBK2P0C263 348 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 IL9P15248 144 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 BMP7P18075 431 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 H2BFSP57053 126 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 CAMK1Q14012 370 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 PDSS1Q5T2R2 415 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 B3GNTL1Q67FW5 361 aaPredicted RBP15.28■□□□□ 0.04
TPM1-228ENST00000560975 ZNF626Q68DY1 528 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 ELP2Q6IA86 826 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 FCRLAQ7L513 359 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 CYB5D2Q8WUJ1 264 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 FAM83CQ9BQN1 747 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 WSB2Q9NYS7 404 aaPredicted RBP15.28■□□□□ 0.04
TPM1-228ENST00000560975 TAS2R5Q9NYW4 299 aa15.28■□□□□ 0.04
TPM1-228ENST00000560975 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.27■□□□□ 0.04
TPM1-228ENST00000560975 OR6C74A6NCV1 312 aa15.27■□□□□ 0.04
TPM1-228ENST00000560975 OR2A4O95047 310 aa15.27■□□□□ 0.04
TPM1-228ENST00000560975 GDI2P50395 445 aaKnown RBP15.27■□□□□ 0.04
TPM1-228ENST00000560975 RPE65Q16518 533 aa15.27■□□□□ 0.04
TPM1-228ENST00000560975 OR7E24Q6IFN5 339 aa15.27■□□□□ 0.04
TPM1-228ENST00000560975 THSD4Q6ZMP0 1018 aa15.27■□□□□ 0.04
TPM1-228ENST00000560975 CDH26Q8IXH8 852 aa15.27■□□□□ 0.04
TPM1-228ENST00000560975 BRIX1Q8TDN6 353 aaKnown RBP15.27■□□□□ 0.04
TPM1-228ENST00000560975 FCAMRQ8WWV6 532 aa15.27■□□□□ 0.04
TPM1-228ENST00000560975 OR2A7Q96R45 310 aa15.27■□□□□ 0.04
TPM1-228ENST00000560975 PDCD1LG2Q9BQ51 273 aa15.27■□□□□ 0.04
TPM1-228ENST00000560975 VN1R3Q9BXE9 311 aa15.27■□□□□ 0.04
TPM1-228ENST00000560975 C1QTNF2Q9BXJ5 285 aa15.27■□□□□ 0.04
TPM1-228ENST00000560975 TMPRSS13Q9BYE2 586 aa15.27■□□□□ 0.04
TPM1-228ENST00000560975 C20orf141Q9NUB4 165 aa15.27■□□□□ 0.04
TPM1-228ENST00000560975 GOSR2O14653 212 aa15.27■□□□□ 0.03
TPM1-228ENST00000560975 CTDSPLO15194 276 aa15.27■□□□□ 0.03
TPM1-228ENST00000560975 ASGR2P07307 311 aa15.27■□□□□ 0.03
TPM1-228ENST00000560975 MAKP20794 623 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms