RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 RNF144AP50876 292 aaPredicted RBP12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 MERTKQ12866 999 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 TAB1Q15750 504 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 NDUFAF6Q330K2 333 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 NCMAPQ5T1S8 102 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 BHLHA15Q7RTS1 189 aaPredicted RBP12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 P2RY8Q86VZ1 359 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 ZNF100Q8IYN0 542 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 OR4A15Q8NGL6 344 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 MIPOL1Q8TD10 442 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 SLC25A43Q8WUT9 341 aaPredicted RBP12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 IGFBPL1Q8WX77 278 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 GTPBP3Q969Y2 492 aaKnown RBP12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 ZHX1-C8orf76Q96EF9 292 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 SLC35G5Q96KT7 338 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 TMEM109Q9BVC6 243 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 POTEKPQ9BYX7 375 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 AKTIPQ9H8T0 292 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 EMC3Q9P0I2 261 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 MKLN1Q9UL63 735 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 SLC35A3Q9Y2D2 325 aa12.09□□□□□ -0.47
SNRPA1-204ENST00000558020 A0A1W2PNR3 127 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 SULT2B1O00204 365 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 TYROBPO43914 113 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 FCMRO60667 390 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 CYTIPO60759 359 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 DNAJA2O60884 412 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 SERPINE1P05121 402 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 UBTFL6P0CB48 400 aaPredicted RBP12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 TFPIP10646 304 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 UQCRC2P22695 453 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 ARRB2P32121 409 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 IDUAP35475 653 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 APOBEC1P41238 236 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 OR3A2P47893 321 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 CLK1P49759 484 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 RPL14P50914 215 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 SESN3P58005 492 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 ABCE1P61221 599 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 VSNL1P62760 191 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 RPS26P62854 115 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 ZNF844Q08AG5 666 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 SKP2Q13309 424 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 PDCD2Q16342 344 aaPredicted RBP12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 DPY19L1Q2PZI1 675 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 OR4F3Q6IEY1 312 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 TMPPEQ6ZT21 453 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 GALNT5Q7Z7M9 940 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 ZNF563Q8TA94 476 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 RAB3IL1Q8TBN0 382 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 PIWIL2Q8TC59 973 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 SMAP2Q8WU79 429 aaPredicted RBP12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 XAGE5Q8WWM1 108 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 PSD2Q9BQI7 771 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 COQ10BQ9H8M1 238 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 ACER3Q9NUN7 267 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 FAIMQ9NVQ4 179 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 RAP2CQ9Y3L5 183 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 WDR45Q9Y484 360 aa12.08□□□□□ -0.48
SNRPA1-204ENST00000558020 RAI1Q7Z5J4 1906 aaPredicted RBP12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 HIVEP2P31629 2446 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 IGHV3-15A0A0B4J1V0 119 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 A0A1W2PP18 115 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 WDR91A4D1P6 747 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 ESPNB1AK53 854 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 ZNF814B7Z6K7 855 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 GPR171O14626 319 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 TM9SF1O15321 606 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 RGS16O15492 202 aaPredicted RBP12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 UGT2B17O75795 530 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 CPSF4O95639 269 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 CREB1P16220 341 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 GGT1P19440 569 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 PCSK6P29122 969 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 CHI3L1P36222 383 aaPredicted RBP12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 ETV4P43268 484 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 DIO1P49895 249 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 ANXA11P50995 505 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 CLNS1AP54105 237 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 HPCAP84074 193 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 PPA1Q15181 289 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 TSC22D1Q15714 1073 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 CHI3L2Q15782 390 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 KRT71Q3SY84 523 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 SYT14P1Q58G82 188 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 AP1ARQ63HQ0 302 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 HEPHL1Q6MZM0 1159 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 WDR93Q6P2C0 686 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 DNAJC14Q6Y2X3 702 aaPredicted RBP12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 MTDHQ86UE4 582 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 LRRC34Q8IZ02 419 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 CLECL1Q8IZS7 167 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 AENQ8WTP8 325 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 TESCQ96BS2 214 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 RADILQ96JH8 1075 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 PPP1R36Q96LQ0 422 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 ZNF350Q9GZX5 532 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 OR51I1Q9H343 314 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 ALG2Q9H553 416 aa12.07□□□□□ -0.48
SNRPA1-204ENST00000558020 SSU72Q9NP77 194 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms