RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 SLC25A25Q6KCM7 469 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 STXBP4Q6ZWJ1 553 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 PTAR1Q7Z6K3 402 aaPredicted RBP3.2□□□□□ -1.9
TDP1-217ENST00000557782 ERICH1Q86X53 443 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 HPS6Q86YV9 775 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 KIR3DL3Q8N743 410 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 B3GNT7Q8NFL0 401 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 OR4F6Q8NGB9 312 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 OR4A4PQ8NGN8 299 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 OR9G4Q8NGQ1 327 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 ASZ1Q8WWH4 475 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.2□□□□□ -1.98e-7■■■■■ 32.1
TDP1-217ENST00000557782 MRPS31Q92665 395 aaKnown RBP3.2□□□□□ -1.9
TDP1-217ENST00000557782 STMN2Q93045 179 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 C8orf44Q96CB5 159 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 NTNG2Q96CW9 530 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 ZBED3Q96IU2 234 aaPredicted RBP3.2□□□□□ -1.9
TDP1-217ENST00000557782 MBOAT4Q96T53 435 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 C1QTNF4Q9BXJ3 329 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 PPA2Q9H2U2 334 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 RHBGQ9H310 441 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 WDR41Q9HAD4 459 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 ADGRL4Q9HBW9 690 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 B3GAT2Q9NPZ5 323 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 DYRK4Q9NR20 520 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 NANSQ9NR45 359 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 INPP5EQ9NRR6 644 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 CUTCQ9NTM9 273 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 THYN1Q9P016 225 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 TMCO1Q9UM00 188 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 PPP1R3CQ9UQK1 317 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 N6AMT1Q9Y5N5 214 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 USP16Q9Y5T5 823 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 CSNK1G3Q9Y6M4 447 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 SALL1Q9NSC2 1324 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 KBTBD11-OT1A0A1B0GTJ5 212 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 SERPINE3A8MV23 424 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 SMIM1B2RUZ4 78 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 TRDCB7Z8K6 153 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 SLCO1B7G3V0H7 640 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 AIM2O14862 343 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 CXCL13O43927 109 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 MAGEC1O60732 1142 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 PFKFB2O60825 505 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 HUS1O60921 280 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 CABYRO75952 493 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 CLPXO76031 633 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 PRSS56P0CW18 603 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 MYL2P10916 166 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 SERPINA2P20848 420 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 FGF9P31371 208 aaPredicted RBP3.19□□□□□ -1.9
TDP1-217ENST00000557782 CD80P33681 288 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 GDF5P43026 501 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 POU3F4P49335 361 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 HLCSP50747 726 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 HSPA2P54652 639 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 INHBEP58166 350 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 RPL8P62917 257 aaKnown RBP3.19□□□□□ -1.9
TDP1-217ENST00000557782 XIAPP98170 497 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 IRF8Q02556 426 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 ARL16Q0P5N6 197 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 ITIH4Q14624 930 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 FAM189A2Q15884 450 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 ZIC1Q15915 447 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 TRIM16LQ309B1 348 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 XKR4Q5GH76 650 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 MUC21Q5SSG8 566 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 CCDC122Q5T0U0 273 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 MEDAGQ5VYS4 303 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 C9orf57Q5W0N0 161 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 SASS6Q6UVJ0 657 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 LCLAT1Q6UWP7 414 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 SLC16A14Q7RTX9 510 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 C16orf82Q7Z2V1 217 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 NUFIP2Q7Z417 695 aaKnown RBP3.19□□□□□ -1.9
TDP1-217ENST00000557782 SLC47A2Q86VL8 602 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 RNF130Q86XS8 419 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 TMEM104Q8NE00 496 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 OR52B6Q8NGF0 335 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 OR13C9Q8NGT0 318 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 ZNF596Q8TC21 504 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 FNDC8Q8TC99 324 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 TRUB1Q8WWH5 349 aaKnown RBP3.19□□□□□ -1.9
TDP1-217ENST00000557782 KIFAP3Q92845 792 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.19□□□□□ -1.9
TDP1-217ENST00000557782 WBP1Q96G27 269 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 KCNS3Q9BQ31 491 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 GAL3ST2Q9H3Q3 398 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 GLIPR2Q9H4G4 154 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 ZNF385DQ9H6B1 395 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 DDX31Q9H8H2 851 aaKnown RBP3.19□□□□□ -1.9
TDP1-217ENST00000557782 TREM1Q9NP99 234 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 ZNF71Q9NQZ8 489 aaPredicted RBP3.19□□□□□ -1.9
TDP1-217ENST00000557782 DEPPQ9NTK1 212 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 ELOVL2Q9NXB9 296 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 STOX2Q9P2F5 926 aaPredicted RBP3.19□□□□□ -1.9
TDP1-217ENST00000557782 CLN8Q9UBY8 286 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 ICAM5Q9UMF0 924 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 PDE10AQ9Y233 779 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 FER1L5A0AVI2 2057 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms