RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 FAM71CQ8NEG0 241 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 NXPE3Q969Y0 559 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 GAL3ST3Q96A11 431 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 MRPL48Q96GC5 212 aaKnown RBP15.09■□□□□ 0.01
SHMT2-232ENST00000557487 TBX5Q99593 518 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 IFT27Q9BW83 186 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 ZNF350Q9GZX5 532 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 TM7SF3Q9NS93 570 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 TCF20Q9UGU0 1960 aaKnown RBP15.09■□□□□ 0.01
SHMT2-232ENST00000557487 E9PI62 339 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 I3L521 148 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 J3QLW9 94 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 ZNF593O00488 134 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-232ENST00000557487 BET1O15155 118 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 SSNA1O43805 119 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 IFNGP01579 166 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 HNRNPA1P09651 372 aaKnown RBP eCLIP15.09■□□□□ 0.01
SHMT2-232ENST00000557487 CD3GP09693 182 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 RRASP10301 218 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 PRG2P13727 222 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 ZNF19P17023 458 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 LCN1P31025 176 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 PTGER1P34995 402 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 EXOSC2Q13868 293 aaKnown RBP15.09■□□□□ 0.01
SHMT2-232ENST00000557487 ST3GAL2Q16842 350 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 UBE2NLQ5JXB2 153 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 PLPP4Q5VZY2 271 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 RTL4Q6ZR62 310 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 C12orf40Q86WS4 652 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 ADGRG3Q86Y34 549 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 ZNF619Q8N2I2 560 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 FBXL6Q8N531 539 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 SLC16A11Q8NCK7 471 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 OR2L3Q8NG85 312 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 OR4C6Q8NH72 309 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 SMPDL3BQ92485 455 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 CDS1Q92903 461 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 LCORQ96JN0 433 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-232ENST00000557487 MRI1Q9BV20 369 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 ZNF436Q9C0F3 470 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-232ENST00000557487 KIF25Q9UIL4 384 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 ST6GALNAC2Q9UJ37 374 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 SIGLEC7Q9Y286 467 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 MED31Q9Y3C7 131 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 LOC105369274A0A096LPK9 316 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 CDHR4A6H8M9 788 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 PRRT4C9JH25 899 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 KHNYNO15037 678 aaKnown RBP15.08■□□□□ 0
SHMT2-232ENST00000557487 REM1O75628 298 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 AK1P00568 194 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 UCHL1P09936 223 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 LINC00271P0C7V0 271 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 MAKP20794 623 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 NT5EP21589 574 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 DGCR2P98153 550 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 FGFBP1Q14512 234 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 KRT33BQ14525 404 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 OR1Q1Q15612 314 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 FAM27D1Q5T7N8 215 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 METTL11BQ5VVY1 283 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 SEZ6L2Q6UXD5 910 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 OR4N4Q8N0Y3 316 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 LSMEM1Q8N8F7 131 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 ZNF527Q8NB42 609 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 KAT2AQ92830 837 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 GHSRQ92847 366 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 C10orf90Q96M02 699 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 GUCD1Q96NT3 240 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 SDF2Q99470 211 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 DPCDQ9BVM2 203 aaPredicted RBP15.08■□□□□ 0
SHMT2-232ENST00000557487 SPRTNQ9H040 489 aaPredicted RBP15.08■□□□□ 0
SHMT2-232ENST00000557487 MED20Q9H944 212 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 NANSQ9NR45 359 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 CLDND1Q9NY35 253 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 HEATR5BQ9P2D3 2071 aa15.08■□□□□ 0
SHMT2-232ENST00000557487 A0A1B0GUH1 482 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 SULT1B1O43704 296 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 LYPD3O95274 346 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 IFI6P09912 130 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 NID1P14543 1247 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 PRKACBP22694 351 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 CCR9P51686 369 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 GBX2P52951 348 aaPredicted RBP15.07■□□□□ 0
SHMT2-232ENST00000557487 MRPS10P82664 201 aaKnown RBP15.07■□□□□ 0
SHMT2-232ENST00000557487 DHODHQ02127 395 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 PUDPQ08623 228 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 MFSD13AQ14CX5 517 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 AANATQ16613 207 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 AMZ1Q400G9 498 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 ZNF425Q6IV72 752 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 ARHGAP11AQ6P4F7 1023 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 ZNF613Q6PF04 617 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 POMGNT2Q8NAT1 580 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 C17orf47Q8NEP4 570 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 OR7G2Q8NG99 324 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 C15orf40Q8WUR7 153 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 BPIFA2Q96DR5 249 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 SMIM19Q96E16 107 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 ZFP3Q96NJ6 502 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 LGR4Q9BXB1 951 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms