RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SLC31A1O15431 190 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 GGCTO75223 188 aaKnown RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 OPN1SWP03999 348 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 LRIT3Q3SXY7 679 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 NMNAT1Q9HAN9 279 aaPredicted RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 EXOSC3Q9NQT5 275 aaKnown RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 PCDHGA9Q9Y5G4 932 aaKnown RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 V9GYS6 101 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 AKAP11Q9UKA4 1901 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 S100A11P31949 105 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 RFX2P48378 723 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 TMEM201Q5SNT2 666 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 B3GNTL1Q67FW5 361 aaPredicted RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 ZNF836Q6ZNA1 936 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 INTS14Q96SY0 518 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 TMEM43Q9BTV4 400 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 SLC12A9Q9BXP2 914 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 B4GALT6Q9UBX8 382 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 SLC27A5Q9Y2P5 690 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 KRBA1A5PL33 1030 aa8.34□□□□□ -1.08
SYNE3-205ENST00000557275 RNASEK-C17orf49H0YIS7 233 aa8.34□□□□□ -1.08
SYNE3-205ENST00000557275 JMJD7P0C870 316 aa8.34□□□□□ -1.08
SYNE3-205ENST00000557275 SMAGPQ0VAQ4 97 aa8.34□□□□□ -1.08
SYNE3-205ENST00000557275 NFATC4Q14934 902 aa8.34□□□□□ -1.08
SYNE3-205ENST00000557275 MICAQ29983 383 aa8.34□□□□□ -1.08
SYNE3-205ENST00000557275 TMEM236Q5W0B7 351 aa8.34□□□□□ -1.08
SYNE3-205ENST00000557275 COPS9Q8WXC6 57 aa8.34□□□□□ -1.08
SYNE3-205ENST00000557275 DNAJC19Q96DA6 116 aa8.34□□□□□ -1.08
SYNE3-205ENST00000557275 ARHGDIGQ99819 225 aa8.34□□□□□ -1.08
SYNE3-205ENST00000557275 SMOXQ9NWM0 555 aa8.34□□□□□ -1.08
SYNE3-205ENST00000557275 OR6C2Q9NZP2 312 aa8.34□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF281Q9Y2X9 895 aa8.34□□□□□ -1.08
SYNE3-205ENST00000557275 MPDZO75970 2070 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 OR5K3A6NET4 321 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 GLOD5A6NK44 160 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 SOCS2O14508 198 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 B4GAT1O43505 415 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 OR10J4P0C629 311 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 STAG3L3P0CL85 134 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 FAM213BQ8TBF2 198 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 LMX1AQ8TE12 382 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 MAP3K3Q99759 626 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 EHFQ9NZC4 300 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 SUSD2Q9UGT4 822 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 TMX2-CTNND1H3BSU7 103 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 ADH5P11766 374 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 DRD5P21918 477 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 IL2RGP31785 369 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 FBXW12Q6X9E4 464 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 ASPGQ86U10 573 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF596Q8TC21 504 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 KCNE4Q8WWG9 221 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 GGHQ92820 318 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 PSMG2Q969U7 264 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 HRASLSQ9HDD0 168 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 FAM208AQ9UK61 1670 aaKnown RBP8.33□□□□□ -1.08
SYNE3-205ENST00000557275 TTC24A2A3L6 582 aaPredicted RBP8.33□□□□□ -1.08
SYNE3-205ENST00000557275 H0Y8G0 127 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF728P0DKX0 622 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 TPPP2P59282 170 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 INTS5Q6P9B9 1019 aaKnown RBP8.33□□□□□ -1.08
SYNE3-205ENST00000557275 TPRG1Q6ZUI0 275 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 SLC24A4Q8NFF2 622 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 C14orf79Q96F83 325 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 PIAS1O75925 651 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 PFKMP08237 780 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 STT3AP46977 705 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 DEFB115Q30KQ5 88 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 IL20RBQ6UXL0 311 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 CATSPERDQ86XM0 798 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 C2CD4AQ8NCU7 369 aaPredicted RBP8.33□□□□□ -1.08
SYNE3-205ENST00000557275 CNIH3Q8TBE1 160 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 SCLYQ96I15 445 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 RBFOX1Q9NWB1 397 aaKnown RBP8.33□□□□□ -1.08
SYNE3-205ENST00000557275 STRAPQ9Y3F4 350 aaKnown RBP8.33□□□□□ -1.08
SYNE3-205ENST00000557275 V9GY05 133 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 A0A0A6YYJ9 748 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 PMS2P2O95744 297 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 ACKR3P25106 362 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 UQCRFS1P47985 274 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 SPATC1Q76KD6 591 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 DMBX1Q8NFW5 382 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 APH1BQ8WW43 257 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 DOCK11Q5JSL3 2073 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 ATRNL1Q5VV63 1379 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 NR0B1P51843 470 aaKnown RBP8.33□□□□□ -1.08
SYNE3-205ENST00000557275 UFM1P61960 85 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 SPANXN4Q5MJ08 99 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 FAM185AQ8N0U4 392 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 PCNX1Q96RV3 2341 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 UBL3O95164 117 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 ADRB1P08588 477 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 CPOXP36551 454 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 SLC11A1P49279 550 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 NKPD1Q17RQ9 610 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 DUSP28Q4G0W2 176 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 PPP1R3BQ86XI6 285 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 PRSS58Q8IYP2 241 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 OR11L1Q8NGX0 322 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 KCNG3Q8TAE7 436 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms