RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 LCN10Q6JVE6 187 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 C16orf47Q6ZP98 133 aaPredicted RBP16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 LSMEM1Q8N8F7 131 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 OR1N1Q8NGS0 311 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 OR14A16Q8NHC5 309 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 TBC1D15Q8TC07 691 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 RNFT2Q96EX2 444 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 CRELD1Q96HD1 420 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 SH3YL1Q96HL8 342 aaPredicted RBP16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 KLHDC3Q9BQ90 382 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 RTN4RQ9BZR6 473 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 CFL2Q9Y281 166 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 EFCAB9A8MZ26 197 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 LRRN3E7EW58 273 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 GTPBP1O00178 669 aaKnown RBP16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 HEXBP07686 556 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 TBXA2RP21731 343 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 TMED10P49755 219 aaKnown RBP16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 NCF4Q15080 339 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 TSTQ16762 297 aaKnown RBP16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 FAM69BQ5VUD6 431 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 ULK3Q6PHR2 472 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 B3GLCTQ6Y288 498 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 C9orf43Q8TAL5 461 aaPredicted RBP16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 CEP76Q8TAP6 659 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 NACC2Q96BF6 587 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 LGALS12Q96DT0 336 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 MGLLQ99685 303 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 TEX12Q9BXU0 123 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 WWTR1Q9GZV5 400 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 RNF167Q9H6Y7 350 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 AKIRIN1Q9H9L7 192 aaPredicted RBP16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 ERGIC3Q9Y282 383 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 LOC100506127A0A0U1RQW1 187 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 IDSB3KWA1 339 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 M0R3G1 203 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 PRODHO43272 600 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 AIREO43918 545 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 BMP7P18075 431 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 COPZ1P61923 177 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 SLC25A30Q5SVS4 291 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 CMIPQ8IY22 773 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 CYP4Z2PQ8N1L4 340 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 ZNF527Q8NB42 609 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 OR52L1Q8NGH7 329 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 THAP3Q8WTV1 239 aaPredicted RBP16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 PRRG3Q9BZD7 231 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 OR51E2Q9H255 320 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 MED20Q9H944 212 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 NCOR1O75376 2440 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 FUOMA2VDF0 154 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 CSO75390 466 aaKnown RBP16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 IL12BP29460 328 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 ETV5P41161 510 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 RGS6P49758 472 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 CLK1P49759 484 aaKnown RBP16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 ENTPD1P49961 510 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 ETV1P50549 477 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 DCDP81605 110 aaKnown RBP16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 SLC23A3Q6PIS1 610 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 TMPRSS11FQ6ZWK6 438 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 SLC29A4Q7RTT9 530 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 ZNF367Q7RTV3 350 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 SLC46A3Q7Z3Q1 461 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 OAFQ86UD1 273 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 PPP1R3BQ86XI6 285 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 PLPP5Q8NEB5 264 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 TNFRSF13CQ96RJ3 184 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 IFT27Q9BW83 186 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 ZBTB20Q9HC78 741 aaPredicted RBP16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 SLC35A3Q9Y2D2 325 aa16.8■□□□□ 0.28
SDR39U1-220ENST00000556548 EFCAB7A8K855 629 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 SLC22A1O15245 554 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 UBL4AP11441 157 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 SOX3P41225 446 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 MTNR1AP48039 350 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 CDH11P55287 796 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 CPOQ8IVL8 374 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 BRIX1Q8TDN6 353 aaKnown RBP16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 ZNF524Q96C55 264 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 SIGLEC7Q9Y286 467 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 TMEM5Q9Y2B1 443 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 ZC3H12DA2A288 527 aaKnown RBP16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 SOCS6O14544 535 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 RAB36O95755 333 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 CTBP2P56545 445 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 RPS3AP61247 264 aaKnown RBP16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 PLCXD2Q0VAA5 305 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 SLCO6A1Q86UG4 719 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 LRRC17Q8N6Y2 441 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 ART5Q96L15 291 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 ZNF426Q9BUY5 554 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 ARRDC1-AS1Q9H2J1 176 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 HINT3Q9NQE9 182 aaKnown RBP16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 FBXO4Q9UKT5 387 aa16.79■□□□□ 0.28
SDR39U1-220ENST00000556548 HEATR5AQ86XA9 2040 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 KDM4EB2RXH2 506 aaPredicted RBP16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 BHLHE40O14503 412 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 ZNF12P17014 697 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 GAS1P54826 345 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms