RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 FABP5Q01469 135 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 GPR50Q13585 617 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 NANOGP1Q8N7R0 232 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 OR5W2Q8NH69 310 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 MOAP1Q96BY2 351 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 HYLS1Q96M11 299 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 SRRQ9GZT4 340 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 ADAM18Q9Y3Q7 739 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 AP1M2Q9Y6Q5 423 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 POLR1CO15160 346 aaPredicted RBP13.8□□□□□ -0.2
CUX1-215ENST00000556210 DBIP07108 87 aaKnown RBP13.8□□□□□ -0.2
CUX1-215ENST00000556210 SLC6A6P31641 620 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 HTRA4P83105 476 aaPredicted RBP13.8□□□□□ -0.2
CUX1-215ENST00000556210 FAM205BPQ63HN1 556 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 TMEM99Q8N816 258 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 HYKKA2RU49 373 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 TMEM150CB9EJG8 249 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 RGS13O14921 159 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 SPINT1O43278 529 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 LILRB5O75023 590 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 MAS1P04201 325 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 CSF3P09919 207 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 OMPP47874 163 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 PCBP3P57721 371 aaKnown RBP13.8□□□□□ -0.2
CUX1-215ENST00000556210 UBE2Q1Q7Z7E8 422 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 MEIOBQ8N635 442 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 IL17RCQ8NAC3 791 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 SERINC2Q96SA4 455 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 NUDT15Q9NV35 164 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 RDH8Q9NYR8 311 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 CDH10Q9Y6N8 788 aa13.8□□□□□ -0.2
CUX1-215ENST00000556210 ANXA2P2A6NMY6 339 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 GPR75O95800 540 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 ANXA2P07355 339 aaKnown RBP13.79□□□□□ -0.2
CUX1-215ENST00000556210 STAT5AP42229 794 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 TPMTP51580 245 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 GAS6Q14393 721 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 NFATC4Q14934 902 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 P2RY14Q15391 338 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 NKAIN2Q5VXU1 208 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 ZNF836Q6ZNA1 936 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 CAMKMTQ7Z624 323 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 CDRT4Q8N9R6 151 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 MFSD9Q8NBP5 474 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 ZDHHC1Q8WTX9 485 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 SMPDL3BQ92485 455 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 RFT1Q96AA3 541 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 SDF2Q99470 211 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 ELF4Q99607 663 aaPredicted RBP13.79□□□□□ -0.2
CUX1-215ENST00000556210 C12orf4Q9NQ89 552 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 DHCR7Q9UBM7 475 aaKnown RBP13.79□□□□□ -0.2
CUX1-215ENST00000556210 CD207Q9UJ71 328 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 FKBP7Q9Y680 259 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 MN1Q10571 1320 aaPredicted RBP13.79□□□□□ -0.2
CUX1-215ENST00000556210 ACOD1A6NK06 481 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 SCDO00767 359 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 P2RX6O15547 441 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 CELA2BP08218 269 aaPredicted RBP13.79□□□□□ -0.2
CUX1-215ENST00000556210 MYF5P13349 255 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 SNRPBP14678 240 aaKnown RBP13.79□□□□□ -0.2
CUX1-215ENST00000556210 TNFRSF17Q02223 184 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 PIAS4Q8N2W9 510 aaPredicted RBP13.79□□□□□ -0.2
CUX1-215ENST00000556210 OR8S1Q8NH09 359 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 GOT1L1Q8NHS2 421 aaPredicted RBP13.79□□□□□ -0.2
CUX1-215ENST00000556210 FBLIM1Q8WUP2 373 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 TRMT61AQ96FX7 289 aaKnown RBP13.79□□□□□ -0.2
CUX1-215ENST00000556210 MRPL48Q96GC5 212 aaKnown RBP13.79□□□□□ -0.2
CUX1-215ENST00000556210 PDCD1LG2Q9BQ51 273 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 RBFOX1Q9NWB1 397 aaKnown RBP13.79□□□□□ -0.2
CUX1-215ENST00000556210 CENPVL1A0A0U1RR11 272 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 MEIS3P1A6NDR6 274 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 CXCR1P25024 350 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 ACSM3Q53FZ2 586 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 ZNF619Q8N2I2 560 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 TRMT10AQ8TBZ6 339 aaKnown RBP13.79□□□□□ -0.2
CUX1-215ENST00000556210 LINC00615Q96LM1 132 aaPredicted RBP13.79□□□□□ -0.2
CUX1-215ENST00000556210 NMNAT3Q96T66 252 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 MAP3K3Q99759 626 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 DPAGT1Q9H3H5 408 aa13.79□□□□□ -0.2
CUX1-215ENST00000556210 FLRT2O43155 660 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 KIR2DL3P43628 341 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 BTG2P78543 158 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 GPLD1P80108 840 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 NTRK2Q16620 822 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 LEG1Q6P5S2 330 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 ZNF511Q8NB15 262 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 OR8D4Q8NGM9 314 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 HCAR2Q8TDS4 363 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 TSSK2Q96PF2 358 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 WASH6PQ9NQA3 447 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 C20orf141Q9NUB4 165 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 DAPP1Q9UN19 280 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 PPIEQ9UNP9 301 aaKnown RBP13.78□□□□□ -0.2
CUX1-215ENST00000556210 PRAMEF27A3QJZ7 478 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 RNH1P13489 461 aaKnown RBP13.78□□□□□ -0.2
CUX1-215ENST00000556210 BLKP51451 505 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 OR10A3P58181 314 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 MAPK14Q16539 360 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 MRGPRX1Q96LB2 322 aa13.78□□□□□ -0.2
CUX1-215ENST00000556210 NKX3-1Q99801 234 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms