RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 KLK4Q9Y5K2 254 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 CACNG2Q9Y698 323 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 LOC100509620A0A075B734 347 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 CD8B2A6NJW9 211 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 AP1G1O43747 822 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 TGM6O95932 706 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 HBE1P02100 147 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 CD8BP10966 210 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 SELEP16581 610 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 POU3F3P20264 500 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-216ENST00000556083 GDF1P27539 372 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 FAM189BP81408 668 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 TEKQ02763 1124 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 HMGN3Q15651 99 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 KCNG3Q8TAE7 436 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 PTERQ96BW5 349 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 OR14A2Q96R54 314 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 PFDN5Q99471 154 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 TCEAL7Q9BRU2 100 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 SEMA6CQ9H3T2 930 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 ELOVL3Q9HB03 270 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 TRAV36DV7A0A075B6V5 113 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 ATP6V1G1O75348 118 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 MPIG6BO95866 241 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 IFNA17P01571 189 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 FCER2P06734 321 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 CR2P20023 1033 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 SGSHP51688 502 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 MAP2K6P52564 334 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 GPR18Q14330 331 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 PCGF3Q3KNV8 242 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 SULF2Q8IWU5 870 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 DEFB119Q8N690 84 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 UBXN10Q96LJ8 280 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 USB1Q9BQ65 265 aaKnown RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 PSD2Q9BQI7 771 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 PBX4Q9BYU1 374 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 SAP130Q9H0E3 1048 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 SPACA1Q9HBV2 294 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 FBXL3Q9UKT7 428 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 CCDC88AQ3V6T2 1871 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 A0A1W2PQL4 384 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 DPM1O60762 260 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 KCNK2O95069 426 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 SLC34A2O95436 690 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 LSSP48449 732 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 F2RL1P55085 397 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 PEA15Q15121 130 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 TSSK4Q6SA08 328 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 RPS27LQ71UM5 84 aaKnown RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 GALNT11Q8NCW6 608 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 KLHDC9Q8NEP7 349 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 OR52R1Q8NGF1 315 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 NANPQ8TBE9 248 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 TFAP2CQ92754 450 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 MVB12AQ96EY5 273 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 OR7D2Q96RA2 312 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 PAAF1Q9BRP4 392 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 DPH1Q9BZG8 443 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 TMEM38AQ9H6F2 299 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 OLAHQ9NV23 265 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 GPR83Q9NYM4 423 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 IL20RAQ9UHF4 553 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 A0A0A6YYC8 382 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 SLC9B1P1A6NJY1 282 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 I3L1I5 382 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 AURKAO14965 403 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 CTNSO60931 367 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 GAAP10253 952 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 CTHP32929 405 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 MAGEA3P43357 314 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 RPS5P46782 204 aaKnown RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 PTH2RP49190 550 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 PLGLAQ15195 96 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 SLC5A12Q1EHB4 618 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 ACSM3Q53FZ2 586 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 SBSNQ6UWP8 590 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 KMT5CQ86Y97 462 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 OR6V1Q8N148 313 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 SMAP2Q8WU79 429 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 MS4A4AQ96JQ5 239 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 TP63Q9H3D4 680 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 EGLN3Q9H6Z9 239 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 MAN2C1Q9NTJ4 1040 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 STEAP1Q9UHE8 339 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 RBMX2Q9Y388 322 aaKnown RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 PLEKHM1Q9Y4G2 1056 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 IGLV3-10A0A075B6K4 115 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 MYADML2A6NDP7 307 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 GABRR3A8MPY1 467 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 NPIPA7E9PJI5 369 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 RRP8O43159 456 aaKnown RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 LCKP06239 509 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 NPIPA8P0DM63 369 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 CD27P26842 260 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 CCR7P32248 378 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 GIPRP48546 466 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF648Q5T619 568 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 THAP3Q8WTV1 239 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms