RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ALPPP05187 535 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 CISD3P0C7P0 127 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 ZNF18P17022 549 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 TSPAN8P19075 237 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 HSPA1LP34931 641 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 KRT83P78385 493 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 SLC10A7Q0GE19 358 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 PRSS8Q16651 343 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 KRTAP13-4Q3LI77 160 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 IYDQ6PHW0 289 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 TMEM26Q6ZUK4 368 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 NEGR1Q7Z3B1 354 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 ZSCAN4Q8NAM6 433 aaPredicted RBP1.1□□□□□ -2.23
SRP54-207ENST00000555535 PAQR8Q8TEZ7 354 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 KRT35Q92764 455 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 CELF6Q96J87 481 aaKnown RBP1.1□□□□□ -2.23
SRP54-207ENST00000555535 MS4A14Q96JA4 679 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 CITED1Q99966 193 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 POLR3FQ9H1D9 316 aaPredicted RBP1.1□□□□□ -2.23
SRP54-207ENST00000555535 IL1RAPL2Q9NP60 686 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 B3GNT2Q9NY97 397 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 DEC1Q9P2X7 70 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 KIF25Q9UIL4 384 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 ASF1AQ9Y294 204 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 RPGRIP1LQ68CZ1 1315 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 SYCE3A1L190 88 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 FCN1O00602 326 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 ZBTB14O43829 449 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 SLITRK3O94933 977 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 PNMA6AP0CW24 399 aaPredicted RBP1.09□□□□□ -2.23
SRP54-207ENST00000555535 SERPINA2P20848 420 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 NPY1RP25929 384 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 TGFBR3Q03167 851 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 PPP1R8Q12972 351 aaKnown RBP1.09□□□□□ -2.23
SRP54-207ENST00000555535 HFEQ30201 348 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 TMEM255AQ5JRV8 349 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 DNLZQ5SXM8 178 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 ZNF880Q6PDB4 577 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 UNC45BQ8IWX7 931 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 NRMQ8IXM6 262 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 NDRG1Q92597 394 aaKnown RBP1.09□□□□□ -2.23
SRP54-207ENST00000555535 VMP1Q96GC9 406 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 ELMO2Q96JJ3 720 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 PGLYRP4Q96LB8 373 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 TSG101Q99816 390 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 KLHDC3Q9BQ90 382 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 SLC25A51Q9H1U9 297 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 SLC25A37Q9NYZ2 338 aa1.09□□□□□ -2.23
SRP54-207ENST00000555535 EIF3LQ9Y262 564 aaKnown RBP1.09□□□□□ -2.23
SRP54-207ENST00000555535 B4GALT5O43286 388 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 HCRTR1O43613 425 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 FMO6PO60774 539 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 CBR3O75828 277 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 PNPP00491 289 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 PRDX6P30041 224 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 ATP5DP30049 168 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 HNRNPFP52597 415 aaKnown RBP1.08□□□□□ -2.24
SRP54-207ENST00000555535 YBEYP58557 167 aaPredicted RBP1.08□□□□□ -2.24
SRP54-207ENST00000555535 TAS2R19P59542 299 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 KIAA1024LP59773 190 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 SRP54P61011 504 aaKnown RBP1.08□□□□□ -2.24
SRP54-207ENST00000555535 SSTP61278 116 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 ENPEPQ07075 957 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 CCDC173Q0VFZ6 552 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 TIGITQ495A1 244 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 CTRB2Q6GPI1 263 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 DLEU7Q6UYE1 221 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 ZNF410Q86VK4 478 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 PCP2Q8IVA1 136 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 C10orf53Q8N6V4 93 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 CCNYQ8ND76 341 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 ACER1Q8TDN7 264 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 SMARCD2Q92925 531 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 DTD2Q96FN9 168 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 NFKBIZQ9BYH8 718 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 NACA2Q9H009 215 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 DDX47Q9H0S4 455 aaKnown RBP1.08□□□□□ -2.24
SRP54-207ENST00000555535 CALHM2Q9HA72 323 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 WRAP73Q9P2S5 460 aaPredicted RBP1.08□□□□□ -2.24
SRP54-207ENST00000555535 ZNF629Q9UEG4 869 aaPredicted RBP1.08□□□□□ -2.24
SRP54-207ENST00000555535 NUDCQ9Y266 331 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 DOCK9Q9BZ29 2069 aa1.08□□□□□ -2.24
SRP54-207ENST00000555535 PDS5BQ9NTI5 1447 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 HELTA6NFD8 242 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 PP2D1A8MPX8 630 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 H3BTX0 84 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 SULT2B1O00204 365 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 ADAM12O43184 909 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 ENTPD5O75356 428 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 GSTT2P0CG29 244 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 GSTT2BP0CG30 244 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 ICAM2P13598 275 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 COL8A2P25067 703 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 NMT1P30419 496 aaKnown RBP1.07□□□□□ -2.24
SRP54-207ENST00000555535 GDI1P31150 447 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 COPB2P35606 906 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 ZNF763Q0D2J5 394 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 SNTB2Q13425 540 aaKnown RBP1.07□□□□□ -2.24
SRP54-207ENST00000555535 TSTA3Q13630 321 aaPredicted RBP1.07□□□□□ -2.24
SRP54-207ENST00000555535 GNMTQ14749 295 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms