RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 ADAMDEC1O15204 470 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 OIP5O43482 229 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 ADAM11O75078 769 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 SOD3P08294 240 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 DANCRP0C864 163 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 NPIPA8P0DM63 369 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 ATP6V1C1P21283 382 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 CDKN1AP38936 164 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 CLNS1AP54105 237 aaKnown RBP10.52□□□□□ -0.73
SRP54-203ENST00000553544 RPS26P62854 115 aaKnown RBP10.52□□□□□ -0.73
SRP54-203ENST00000553544 RAC1P63000 192 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 ZNF117Q03924 483 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 CTU2Q2VPK5 515 aaKnown RBP10.52□□□□□ -0.73
SRP54-203ENST00000553544 SPANXN4Q5MJ08 99 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 ANXA8L1Q5VT79 327 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 ALKBH2Q6NS38 261 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 CBLN3Q6UW01 205 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 WDR75Q8IWA0 830 aaKnown RBP10.52□□□□□ -0.73
SRP54-203ENST00000553544 CLEC4FQ8N1N0 589 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 ZNF527Q8NB42 609 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 OR4A15Q8NGL6 344 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 LILRB1Q8NHL6 650 aaPredicted RBP10.52□□□□□ -0.73
SRP54-203ENST00000553544 PHOSPHO1Q8TCT1 267 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 LRRC8CQ8TDW0 803 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 SH3YL1Q96HL8 342 aaPredicted RBP10.52□□□□□ -0.73
SRP54-203ENST00000553544 GMPPAQ96IJ6 420 aaPredicted RBP10.52□□□□□ -0.73
SRP54-203ENST00000553544 MAELQ96JY0 434 aaKnown RBP10.52□□□□□ -0.73
SRP54-203ENST00000553544 HS6ST2Q96MM7 605 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 KCNK17Q96T54 332 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 HDHD5Q9BXW7 423 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 MANSC1Q9H8J5 431 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 BARX1Q9HBU1 254 aaPredicted RBP10.52□□□□□ -0.73
SRP54-203ENST00000553544 NGBQ9NPG2 151 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 AIG1Q9NVV5 245 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 KCNE5Q9UJ90 142 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 PCDHGB4Q9UN71 923 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 DTNAQ9Y4J8 743 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 RNF115Q9Y4L5 304 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 GPR45Q9Y5Y3 372 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 E9PBE3 544 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 ZNF195O14628 629 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 CLOCKO15516 846 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 EFNA2O43921 213 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 FCMRO60667 390 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 AQP8O94778 261 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 AK1P00568 194 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 IGHV4-39P01824 125 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 CD3EP07766 207 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 GUSBP08236 651 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 UQCRC2P22695 453 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 ADH6P28332 368 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 EPHA3P29320 983 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 IL12AP29459 219 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 THBS2P35442 1172 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 SOAT1P35610 550 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 P2RX1P51575 399 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 ZNF41P51814 821 aaPredicted RBP10.51□□□□□ -0.73
SRP54-203ENST00000553544 UFM1P61960 85 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 ZNF141Q15928 474 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 ARHGAP11BQ3KRB8 267 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 KRTAP24-1Q3LI83 254 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 FAM174BQ3ZCQ3 159 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 SAXO2Q658L1 398 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 PPP4R4Q6NUP7 873 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 DNAJC14Q6Y2X3 702 aaPredicted RBP10.51□□□□□ -0.73
SRP54-203ENST00000553544 DNM1P46Q6ZS02 220 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 SPATA19Q7Z5L4 167 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 ANKRD46Q86W74 232 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 ARFGAP2Q8N6H7 521 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 VPS37AQ8NEZ2 397 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 STEAP2Q8NFT2 490 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 ZNF524Q96C55 264 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 NEURL3Q96EH8 262 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 SLC35G5Q96KT7 338 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 RNF145Q96MT1 663 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 CCDC115Q96NT0 180 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 NMUR2Q9GZQ4 415 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 OR51I1Q9H343 314 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 ESRP2Q9H6T0 727 aaKnown RBP10.51□□□□□ -0.73
SRP54-203ENST00000553544 WDR55Q9H6Y2 383 aaPredicted RBP10.51□□□□□ -0.73
SRP54-203ENST00000553544 GLRX2Q9NS18 164 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 BTNL2Q9UIR0 455 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 CARD8Q9Y2G2 431 aa10.51□□□□□ -0.73
SRP54-203ENST00000553544 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.51□□□□□ -0.733e-11■■■■□ 19.8
SRP54-203ENST00000553544 A0A0J9YW62 118 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 A0A1W2PP18 115 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 H3BNH8 94 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 ETV2O00321 342 aaPredicted RBP10.5□□□□□ -0.73
SRP54-203ENST00000553544 EIF1AYO14602 144 aaKnown RBP10.5□□□□□ -0.73
SRP54-203ENST00000553544 GPRIN2O60269 458 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 DNAJA2O60884 412 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 STX11O75558 287 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 NTN1O95631 604 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 CPSF4O95639 269 aaKnown RBP10.5□□□□□ -0.73
SRP54-203ENST00000553544 C1QCP02747 245 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 PSMB1P20618 241 aaKnown RBP10.5□□□□□ -0.73
SRP54-203ENST00000553544 S100A3P33764 101 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 EIF1P41567 113 aaKnown RBP10.5□□□□□ -0.73
SRP54-203ENST00000553544 EIF1AXP47813 144 aaKnown RBP10.5□□□□□ -0.73
SRP54-203ENST00000553544 SLC6A8P48029 635 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms