RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 MMABQ96EY8 250 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 SENP5Q96HI0 755 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 NDC1Q9BTX1 674 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 LMAN2LQ9H0V9 348 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 EVA1BQ9NVM1 165 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 A3GALT2U3KPV4 340 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 WDFY3Q8IZQ1 3526 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 CDHR4A6H8M9 788 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 STK25O00506 426 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 FPR3P25089 353 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 STAT5AP42229 794 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 ERVK-25P63136 954 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 NFATC4Q14934 902 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 ZNF425Q6IV72 752 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 GDPGP1Q6ZNW5 385 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 SHISA6Q6ZSJ9 500 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 SSX6Q7RTT6 188 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 SLC22A18Q96BI1 424 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 NRSN2Q9GZP1 204 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 SRA1Q9HD15 236 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 PNO1Q9NRX1 252 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 BABAM2Q9NXR7 383 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 DTX4Q9Y2E6 619 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 HEBP2Q9Y5Z4 205 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 ALG5Q9Y673 324 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 A0A1B0GWA3 101 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 A0A1W2PQF6 199 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 C17orf51A8MQB3 221 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 PLRG1O43660 514 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 HHEXQ03014 270 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 GPR50Q13585 617 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 MZT2BQ6NZ67 158 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 Q6ZS52 159 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 ZNF619Q8N2I2 560 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 VWA5B2Q8N398 1253 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 OR5M3Q8NGP4 307 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 SFXN5Q8TD22 340 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 NMNAT3Q96T66 252 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 GAS2L1Q99501 681 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 CDCP1Q9H5V8 836 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 TRIM36Q9NQ86 728 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 ALPK3Q96L96 1907 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 E9PQ18 207 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 RNF13O43567 381 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 ADAM11O75078 769 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 ITPKBP27987 946 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 FAM53BQ14153 422 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 ZNHIT3Q15649 155 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 AMZ1Q400G9 498 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 AADACL4Q5VUY2 407 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 FCRL6Q6DN72 434 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 MZT2AQ6P582 158 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 LINC00471Q8N535 108 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 OR4M1Q8NGD0 313 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 SMPDL3BQ92485 455 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 GHSRQ92847 366 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 PTP4A1Q93096 173 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 DHRS1Q96LJ7 313 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 GSDMCQ9BYG8 508 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 NT5DC2Q9H857 520 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 NUDT15Q9NV35 164 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 LRIT1Q9P2V4 623 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 ERVK-19Q9WJR5 959 aa12.65□□□□□ -0.38
PRPF40B-209ENST00000548825 MPDZO75970 2070 aa12.65□□□□□ -0.39
PRPF40B-209ENST00000548825 ZDBF2Q9HCK1 2354 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 TMEM129A0AVI4 362 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 ACOD1A6NK06 481 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 F13BP05160 661 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 HNRNPA2B1P22626 353 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 PRKAR1BP31321 381 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 HES5Q5TA89 166 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 NR2C2APQ86WQ0 139 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 ASCC1Q8N9N2 400 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 OR6C4Q8NGE1 309 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 PMEPA1Q969W9 287 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 ST6GAL2Q96JF0 529 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 C10orf90Q96M02 699 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 SERINC2Q96SA4 455 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 TEAD3Q99594 435 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 ARHGDIGQ99819 225 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 FUZQ9BT04 418 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 OR8D2Q9GZM6 311 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 IL20Q9NYY1 176 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 INMT-MINDY4F8WBC2 141 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 SMAD9O15198 467 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 MYF5P13349 255 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 HTR1FP30939 366 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 ETV6P41212 452 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 ZNF136P52737 540 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 TPBGQ13641 420 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 DECR1Q16698 335 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 MEPCEQ7L2J0 689 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 TRMT10AQ8TBZ6 339 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 RIT1Q92963 219 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 MOAP1Q96BY2 351 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 RASD2Q96D21 266 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 ELF4Q99607 663 aaPredicted RBP12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 CTRCQ99895 268 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 ATF6BQ99941 703 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms