RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 STPG1Q5TH74 334 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 NKAIN4Q8IVV8 208 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 CADM3Q8N126 398 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 OR5L2Q8NGL0 311 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 OR2Y1Q8NGV0 311 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 OMA1Q96E52 524 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 TOR4AQ9NXH8 423 aa15.51■□□□□ 0.07
COPS3-212ENST00000539941 CRNNQ9UBG3 495 aaPredicted RBP15.51■□□□□ 0.07
COPS3-212ENST00000539941 ZNF223Q9UK11 482 aaPredicted RBP15.51■□□□□ 0.07
COPS3-212ENST00000539941 CHP2O43745 196 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 LYPD3O95274 346 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 IGHEP01854 428 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 CRHBPP24387 322 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 ABCD3P28288 659 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 CDC42P60953 191 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 CSNK2BP67870 215 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 TSPAN31Q12999 210 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 PMS2P3Q13401 168 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 FAM199XQ6PEV8 388 aaPredicted RBP15.5■□□□□ 0.07
COPS3-212ENST00000539941 CCDC71Q8IV32 467 aaPredicted RBP15.5■□□□□ 0.07
COPS3-212ENST00000539941 WDR36Q8NI36 951 aaKnown RBP15.5■□□□□ 0.07
COPS3-212ENST00000539941 CHAC2Q8WUX2 184 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 TXNDC15Q96J42 360 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 HS6ST2Q96MM7 605 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 ADOQ96SZ5 270 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 PRSS27Q9BQR3 290 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 NRSN2Q9GZP1 204 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 ADNPQ9H2P0 1102 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 SP140LQ9H930 580 aa15.5■□□□□ 0.07
COPS3-212ENST00000539941 PTRH2Q9Y3E5 179 aaKnown RBP15.5■□□□□ 0.07
COPS3-212ENST00000539941 OR6C70A6NIJ9 312 aa15.49■□□□□ 0.07
COPS3-212ENST00000539941 NOTOA8MTQ0 251 aa15.49■□□□□ 0.07
COPS3-212ENST00000539941 J3QRK9 145 aa15.49■□□□□ 0.07
COPS3-212ENST00000539941 PLD2O14939 933 aa15.49■□□□□ 0.07
COPS3-212ENST00000539941 PRKNO60260 465 aaPredicted RBP15.49■□□□□ 0.07
COPS3-212ENST00000539941 MPZL2O60487 215 aa15.49■□□□□ 0.07
COPS3-212ENST00000539941 KLF7O75840 302 aaPredicted RBP15.49■□□□□ 0.07
COPS3-212ENST00000539941 SEC14L2O76054 403 aa15.49■□□□□ 0.07
COPS3-212ENST00000539941 ANGPTL1O95841 491 aa15.49■□□□□ 0.07
COPS3-212ENST00000539941 DLGAP3O95886 979 aa15.49■□□□□ 0.07
COPS3-212ENST00000539941 UBL4AP11441 157 aa15.49■□□□□ 0.07
COPS3-212ENST00000539941 FPR3P25089 353 aa15.49■□□□□ 0.07
COPS3-212ENST00000539941 OMPP47874 163 aa15.49■□□□□ 0.07
COPS3-212ENST00000539941 RNF144AP50876 292 aaPredicted RBP15.49■□□□□ 0.07
COPS3-212ENST00000539941 EFR3AQ14156 821 aa15.49■□□□□ 0.07
COPS3-212ENST00000539941 TRIP6Q15654 476 aaKnown RBP15.49■□□□□ 0.07
COPS3-212ENST00000539941 C6orf15Q6UXA7 325 aaPredicted RBP15.49■□□□□ 0.07
COPS3-212ENST00000539941 PISDQ9UG56 409 aa15.49■□□□□ 0.07
COPS3-212ENST00000539941 PADI1Q9ULC6 663 aa15.49■□□□□ 0.07
COPS3-212ENST00000539941 TRBV11-1A0A0K0K1C0 115 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 A0A1B0GWA3 101 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 ISPDA4D126 451 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 CDC14CA4D256 554 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 ALG1L2C9J202 215 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 SLC1A7O00341 560 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 TP53P04637 393 aaPredicted RBP15.48■□□□□ 0.07
COPS3-212ENST00000539941 UMODP07911 640 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 RAB40ALP0C0E4 278 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 NAGAP17050 411 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 STAT5AP42229 794 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 RBM34P42696 430 aaKnown RBP15.48■□□□□ 0.07
COPS3-212ENST00000539941 LAIR2Q6ISS4 152 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 ZNF773Q6PK81 442 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 RASSF6Q6ZTQ3 369 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 KCTD8Q6ZWB6 473 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 PRICKLE2Q7Z3G6 844 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 NRMQ8IXM6 262 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 ENTHD1Q8IYW4 607 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 PRR22Q8IZ63 422 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 TMEM255BQ8WV15 326 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 DNAJA4Q8WW22 397 aaPredicted RBP15.48■□□□□ 0.07
COPS3-212ENST00000539941 TMEM239Q8WW34 195 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 SH3YL1Q96HL8 342 aaPredicted RBP15.48■□□□□ 0.07
COPS3-212ENST00000539941 CCNL2Q96S94 520 aaPredicted RBP15.48■□□□□ 0.07
COPS3-212ENST00000539941 IMPAD1Q9NX62 359 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 FLRT3Q9NZU0 649 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 RNF6Q9Y252 685 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 CORINQ9Y5Q5 1042 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 CNOT1A5YKK6 2376 aaKnown RBP15.48■□□□□ 0.07
COPS3-212ENST00000539941 A0A1W2PQ72 361 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 H3BN98 237 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 ZNF264O43296 627 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 KLF4O43474 513 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 ICOSLGO75144 302 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 ZFAND5O76080 213 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 FOLR3P41439 243 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 SERPINB10P48595 397 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 COPZ1P61923 177 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 SKP2Q13309 424 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 PCOLCEQ15113 449 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 TMEM164Q5U3C3 297 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 ULK3Q6PHR2 472 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 Q6ZPB1 254 aaPredicted RBP15.48■□□□□ 0.07
COPS3-212ENST00000539941 AKAP14Q86UN6 197 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 ANKK1Q8NFD2 765 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 RHOXF1Q8NHV9 184 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 CNIH3Q8TBE1 160 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 PHOSPHO1Q8TCT1 267 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 C8orf44Q96CB5 159 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 SPRY4Q9C004 299 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms