RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 DNASE1P24855 282 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 SLC6A6P31641 620 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 PTGER1P34995 402 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 GBX2P52951 348 aaPredicted RBP12.28□□□□□ -0.44
UBE3B-209ENST00000539584 RAB14P61106 215 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 MRPS10P82664 201 aaKnown RBP12.28□□□□□ -0.44
UBE3B-209ENST00000539584 KLF9Q13886 244 aaPredicted RBP12.28□□□□□ -0.44
UBE3B-209ENST00000539584 LTB4RQ15722 352 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 DUSP5Q16690 384 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 ZSWIM7Q19AV6 140 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 UBE2NLQ5JXB2 153 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 IL20RBQ6UXL0 311 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 FBXL6Q8N531 539 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 CDRT4Q8N9R6 151 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 ERMAPQ96PL5 475 aaPredicted RBP12.28□□□□□ -0.44
UBE3B-209ENST00000539584 TBX5Q99593 518 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 TMEM27Q9HBJ8 222 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 THAP10Q9P2Z0 257 aaPredicted RBP12.28□□□□□ -0.44
UBE3B-209ENST00000539584 ST6GALNAC2Q9UJ37 374 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 SERTAD3Q9UJW9 196 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 SLC17A4Q9Y2C5 497 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 FKBP7Q9Y680 259 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 MYO10Q9HD67 2058 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 HTTP42858 3142 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF879B4DU55 563 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 E9PI62 339 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 PDCD5O14737 125 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 SULT1B1O43704 296 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 PEX14O75381 377 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 REM1O75628 298 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 NT5EP21589 574 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 DRD3P35462 400 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 SRP9P49458 86 aaKnown RBP12.27□□□□□ -0.44
UBE3B-209ENST00000539584 E2F1Q01094 437 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 GAB4Q2WGN9 574 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 ELFN2Q5R3F8 820 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 MRPL2Q5T653 305 aaKnown RBP12.27□□□□□ -0.44
UBE3B-209ENST00000539584 RPL22L1Q6P5R6 122 aaKnown RBP12.27□□□□□ -0.44
UBE3B-209ENST00000539584 PAQR7Q86WK9 346 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 TIGD4Q8IY51 512 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 THAP4Q8WY91 577 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 MACROD1Q9BQ69 325 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 OR51V1Q9H2C8 321 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 MED20Q9H944 212 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 DLL4Q9NR61 685 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 INSL6Q9Y581 213 aa12.27□□□□□ -0.44
UBE3B-209ENST00000539584 A0A1W2PS29 197 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 TIMP1P01033 207 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 HTR2AP28223 471 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 PYCR1P32322 319 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 SLC16A1P53985 500 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 OR12D2P58182 307 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 MESP2Q0VG99 397 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 GGTLC2Q14390 218 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 CDK5R1Q15078 307 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 GPR68Q15743 365 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 SLC25A35Q3KQZ1 300 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 DCST2Q5T1A1 773 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 AGBL4Q5VU57 503 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 METTL11BQ5VVY1 283 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 ZNF527Q8NB42 609 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 FAM71CQ8NEG0 241 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 C17orf47Q8NEP4 570 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 GIMAP1Q8WWP7 306 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 CAPNS2Q96L46 248 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 HCAR1Q9BXC0 346 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 NRIP3Q9NQ35 241 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 NANSQ9NR45 359 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 MBNL1Q9NR56 388 aaKnown RBP12.27□□□□□ -0.45
UBE3B-209ENST00000539584 KCMF1Q9P0J7 381 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 MAB21L2Q9Y586 359 aa12.27□□□□□ -0.45
UBE3B-209ENST00000539584 BRCA2P51587 3418 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 LOC105371267A0A1B0GV96 52 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 KHNYNO15037 678 aaKnown RBP12.26□□□□□ -0.45
UBE3B-209ENST00000539584 SSNA1O43805 119 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 ADH1BP00325 375 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 CD3GP09693 182 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 SMIM10L1P0DMW3 83 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 CPMP14384 443 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 CSF2RAP15509 400 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 POLR2CP19387 275 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-209ENST00000539584 CXCL3P19876 107 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 POU3F3P20264 500 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-209ENST00000539584 PEBP1P30086 187 aaKnown RBP12.26□□□□□ -0.45
UBE3B-209ENST00000539584 RPL6Q02878 288 aaKnown RBP12.26□□□□□ -0.45
UBE3B-209ENST00000539584 LGALS3BPQ08380 585 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 BAMBIQ13145 260 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 PDGFRLQ15198 375 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 IRF4Q15306 451 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 LGALSLQ3ZCW2 172 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-209ENST00000539584 FAM27D1Q5T7N8 215 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 FAAH2Q6GMR7 532 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 WDR88Q6ZMY6 472 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 UXS1Q8NBZ7 420 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 OR11H4Q8NGC9 324 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 PFN4Q8NHR9 129 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 ING5Q8WYH8 240 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 SMIM10Q96HG1 83 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 MAP6Q96JE9 813 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 LCORQ96JN0 433 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms