RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 A0A0J9YW62 118 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 C5orf58C9J3I9 102 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 SEC14L5O43304 696 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 ZG16O60844 167 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 LYPD3O95274 346 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 THY1P04216 161 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 CHMP24386 653 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 PRKAR1BP31321 381 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 MSX2P35548 267 aaPredicted RBP11.78□□□□□ -0.52
CHFR-216ENST00000538235 SRYQ05066 204 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 NRF1Q16656 503 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 CMIPQ8IY22 773 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 PGAM4Q8N0Y7 254 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 METTL25Q8N6Q8 603 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 FAM86B1Q8N7N1 296 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 C9orf106Q8NAJ2 232 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 TOR1AIP2Q8NFQ8 470 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 OR2T12Q8NG77 320 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 SARAFQ96BY9 339 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 ARHGDIGQ99819 225 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 ECSITQ9BQ95 431 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 SRXN1Q9BYN0 137 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 PTGES2Q9H7Z7 377 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 CTPS2Q9NRF8 586 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 CLCF1Q9UBD9 225 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 CD300AQ9UGN4 299 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 ACAD8Q9UKU7 415 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 CAMK2AQ9UQM7 478 aa11.78□□□□□ -0.52
CHFR-216ENST00000538235 ZC3H12DA2A288 527 aaKnown RBP11.77□□□□□ -0.53
CHFR-216ENST00000538235 WIPF3A6NGB9 483 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 H3BNH8 94 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 CCL21O00585 134 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 BCKDKO14874 412 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 NUDT14O95848 222 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 TGM6O95932 706 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 ACTL6AO96019 429 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 GLI4P10075 376 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 CPN1P15169 458 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 PTNP21246 168 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 ACVR2AP27037 513 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 SLC6A8P48029 635 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 KCNJ5P48544 419 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 IDH2P48735 452 aaKnown RBP11.77□□□□□ -0.53
CHFR-216ENST00000538235 ZNF41P51814 821 aaPredicted RBP11.77□□□□□ -0.53
CHFR-216ENST00000538235 CBFBQ13951 182 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 ELOAQ14241 798 aaKnown RBP11.77□□□□□ -0.53
CHFR-216ENST00000538235 FXNQ16595 210 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 GLYR1Q49A26 553 aaPredicted RBP11.77□□□□□ -0.53
CHFR-216ENST00000538235 C1orf185Q5T7R7 199 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 POMZP3Q6PJE2 187 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 TRPM8Q7Z2W7 1104 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 TSEN54Q7Z6J9 526 aaKnown RBP11.77□□□□□ -0.53
CHFR-216ENST00000538235 ITLN2Q8WWU7 325 aaPredicted RBP11.77□□□□□ -0.53
CHFR-216ENST00000538235 FIG4Q92562 907 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 PMM1Q92871 262 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 ZBTB8AQ96BR9 441 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 SLC7A6OSQ96CW6 309 aaPredicted RBP11.77□□□□□ -0.53
CHFR-216ENST00000538235 OR11A1Q9GZK7 315 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 ALG2Q9H553 416 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 ACER3Q9NUN7 267 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 EGFL7Q9UHF1 273 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 OSGIN1Q9UJX0 560 aa11.77□□□□□ -0.53
CHFR-216ENST00000538235 NBPF19A0A087WUL8 3843 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 A0A087WZY1 265 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 A0A0G2JNJ9 132 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 A0A1W2PNR3 127 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 TMEM72A0PK05 275 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 ELOVL7A1L3X0 281 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 CFAP73A6NFT4 308 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 CLCA1A8K7I4 914 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 FAAHO00519 579 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 PRRG2O14669 202 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 POU3F2P20265 443 aaPredicted RBP11.76□□□□□ -0.53
CHFR-216ENST00000538235 SFTPDP35247 375 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 EEFSECP57772 596 aaKnown RBP11.76□□□□□ -0.53
CHFR-216ENST00000538235 RBPJQ06330 500 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 ART3Q13508 389 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 VEZF1Q14119 521 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 LRRC23Q53EV4 343 aaPredicted RBP11.76□□□□□ -0.53
CHFR-216ENST00000538235 WLSQ5T9L3 541 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 C6orf89Q6UWU4 347 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 WDR88Q6ZMY6 472 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 ARPINQ7Z6K5 226 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 ADGRG3Q86Y34 549 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 ARMC8Q8IUR7 673 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 CCDC71Q8IV32 467 aaPredicted RBP11.76□□□□□ -0.53
CHFR-216ENST00000538235 LIX1LQ8IVB5 337 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 DEFB107AQ8IZN7 70 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 TNIP2Q8NFZ5 429 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 OR6T1Q8NGN1 323 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 PHF10Q8WUB8 498 aaKnown RBP11.76□□□□□ -0.53
CHFR-216ENST00000538235 C3orf49Q96BT1 292 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 NSL1Q96IY1 281 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 CLPTM1LQ96KA5 538 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 ARL5BQ96KC2 179 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 MRGPRX4Q96LA9 322 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 HOPXQ9BPY8 73 aaPredicted RBP11.76□□□□□ -0.53
CHFR-216ENST00000538235 PIGQQ9BRB3 760 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 TTYH2Q9BSA4 534 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 PINK1Q9BXM7 581 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms