RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 CDC73Q6P1J9 531 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 METAP1DQ6UB28 335 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-226ENST00000533820 ARL14Q8N4G2 192 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 RFLNBQ8N5W9 214 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 OR52L1Q8NGH7 329 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 TRMT10AQ8TBZ6 339 aaKnown RBP17.93■□□□□ 0.46
CAPN1-226ENST00000533820 ORAI1Q96D31 301 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 SLC31A1O15431 190 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 SLC19A2O60779 497 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 PTP4A3O75365 173 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 GNRH1P01148 92 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 HMGN1P05114 100 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 GLAP06280 429 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 CCR6P51684 374 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 BLVRAP53004 296 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 MFSD12Q6NUT3 480 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 SFXN4Q6P4A7 337 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 OR4D9Q8NGE8 314 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 OR5M3Q8NGP4 307 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 ASB6Q9NWX5 421 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 WSB2Q9NYS7 404 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-226ENST00000533820 HTR2AP28223 471 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 MEPCEQ7L2J0 689 aaKnown RBP17.92■□□□□ 0.46
CAPN1-226ENST00000533820 PTP4A1Q93096 173 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 CD180Q99467 661 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 ORAI3Q9BRQ5 295 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 NIPAL2Q9H841 368 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 PRSS44E7EML9 344 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 SGK494L7N484 410 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 LDB3O75112 727 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 SNRPBP14678 240 aaKnown RBP17.92■□□□□ 0.46
CAPN1-226ENST00000533820 CXCL3P19876 107 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 PRKAR1BP31321 381 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 PITPNBP48739 271 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 TNK1Q13470 666 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 RIN1Q13671 783 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 HBMQ6B0K9 141 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 VITQ6UXI7 678 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 ZNF704Q6ZNC4 412 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-226ENST00000533820 ADGRD2Q7Z7M1 963 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 SPPL3Q8TCT6 385 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 ZNF707Q96C28 371 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-226ENST00000533820 TRIM36Q9NQ86 728 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 MGAT4AQ9UM21 535 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 SPEGQ15772 3267 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 LRRC72A6NJI9 287 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 EML2O95834 649 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 GIFP27352 417 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 SLC6A1P30531 599 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 PRPF38BQ5VTL8 546 aaKnown RBP17.92■□□□□ 0.46
CAPN1-226ENST00000533820 AGBL4Q5VU57 503 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 LYPD4Q6UWN0 246 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 PRSS45Q7RTY3 260 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 NRROSQ86YC3 692 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 GJD3Q8N144 294 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 OR2L8Q8NGY9 312 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 GCDHQ92947 438 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-226ENST00000533820 ZNF764Q96H86 408 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-226ENST00000533820 PAWRQ96IZ0 340 aaKnown RBP17.92■□□□□ 0.46
CAPN1-226ENST00000533820 CYSLTR2Q9NS75 346 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 CALML5Q9NZT1 146 aa17.92■□□□□ 0.46
CAPN1-226ENST00000533820 LINC00587B1AMM8 73 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 KLF4O43474 513 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 CHP2O43745 196 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 DRD5P21918 477 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 AK4P27144 223 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-226ENST00000533820 ZNF136P52737 540 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 MRPL2Q5T653 305 aaKnown RBP17.91■□□□□ 0.46
CAPN1-226ENST00000533820 LRRC17Q8N6Y2 441 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 ZNF680Q8NEM1 530 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 HSD17B8Q92506 261 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 PCDHGA9Q9Y5G4 932 aaKnown RBP17.91■□□□□ 0.46
CAPN1-226ENST00000533820 CACNG2Q9Y698 323 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 PRR23D1E9PI22 279 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-226ENST00000533820 NFATC1O95644 943 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 TIMP1P01033 207 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 PRR23D2P0DMB1 279 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-226ENST00000533820 SSTR2P30874 369 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 ACSL1P33121 698 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 TP53I3Q53FA7 332 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 TIGD3Q6B0B8 471 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 SSX6Q7RTT6 188 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 LRRC28Q86X40 367 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-226ENST00000533820 OR11H7Q8NGC8 314 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 OR5J2Q8NH18 312 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 ZNF431Q8TF32 576 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-226ENST00000533820 CREB3L1Q96BA8 519 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 MS4A3Q96HJ5 214 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 PRSS27Q9BQR3 290 aa17.91■□□□□ 0.46
CAPN1-226ENST00000533820 MTHFD2LQ9H903 347 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-226ENST00000533820 PHPT1Q9NRX4 125 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-226ENST00000533820 TOXO94900 526 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 SEC13P55735 322 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 DGCR2P98153 550 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 CRMP1Q14194 572 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 LRRC25Q8N386 305 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-226ENST00000533820 ABHD4Q8TB40 342 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 LCN9Q8WX39 176 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 HS6ST2Q96MM7 605 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 GTPBP2Q9BX10 602 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms