RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 TMEM234Q8WY98 164 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 ROBO4Q8WZ75 1007 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 VPS33AQ96AX1 596 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 SRXN1Q9BYN0 137 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 QRSL1Q9H0R6 528 aaKnown RBP27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 SLC38A1Q9H2H9 487 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 PLSCR4Q9NRQ2 329 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 INTS9Q9NV88 658 aaKnown RBP27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 UQCRHLA0A096LP55 91 aa27.08■■□□□ 1.93
SSSCA1-207ENST00000533115 BCAS1O75363 584 aaPredicted RBP27.08■■□□□ 1.93
SSSCA1-207ENST00000533115 PABPC4LP0CB38 370 aaKnown RBP27.08■■□□□ 1.93
SSSCA1-207ENST00000533115 NID1P14543 1247 aa27.08■■□□□ 1.93
SSSCA1-207ENST00000533115 POU2F1P14859 743 aa27.08■■□□□ 1.93
SSSCA1-207ENST00000533115 MAGEA8P43361 318 aa27.08■■□□□ 1.93
SSSCA1-207ENST00000533115 KCNJ5P48544 419 aa27.08■■□□□ 1.93
SSSCA1-207ENST00000533115 IDH3AP50213 366 aa27.08■■□□□ 1.93
SSSCA1-207ENST00000533115 SESN3P58005 492 aa27.08■■□□□ 1.93
SSSCA1-207ENST00000533115 PPP2R2AP63151 447 aa27.08■■□□□ 1.93
SSSCA1-207ENST00000533115 FBXW10Q5XX13 1052 aa27.08■■□□□ 1.93
SSSCA1-207ENST00000533115 REXO5Q96IC2 774 aaKnown RBP27.08■■□□□ 1.93
SSSCA1-207ENST00000533115 COQ10BQ9H8M1 238 aa27.08■■□□□ 1.93
SSSCA1-207ENST00000533115 ACER3Q9NUN7 267 aa27.08■■□□□ 1.93
SSSCA1-207ENST00000533115 NR2F1P10589 423 aa27.07■■□□□ 1.92
SSSCA1-207ENST00000533115 MRPL19P49406 292 aaKnown RBP27.07■■□□□ 1.92
SSSCA1-207ENST00000533115 MVDP53602 400 aa27.07■■□□□ 1.92
SSSCA1-207ENST00000533115 STX1BP61266 288 aa27.07■■□□□ 1.92
SSSCA1-207ENST00000533115 C3orf33Q6P1S2 294 aa27.07■■□□□ 1.92
SSSCA1-207ENST00000533115 RNF128Q8TEB7 428 aa27.07■■□□□ 1.92
SSSCA1-207ENST00000533115 EBF4Q9BQW3 602 aa27.07■■□□□ 1.92
SSSCA1-207ENST00000533115 EXOSC3Q9NQT5 275 aaKnown RBP27.07■■□□□ 1.92
SSSCA1-207ENST00000533115 TESMINQ9Y4I5 508 aa27.07■■□□□ 1.92
SSSCA1-207ENST00000533115 AGAP5A6NIR3 686 aa27.06■■□□□ 1.92
SSSCA1-207ENST00000533115 CLDN24A6NM45 220 aa27.06■■□□□ 1.92
SSSCA1-207ENST00000533115 SLC7A1P30825 629 aa27.06■■□□□ 1.92
SSSCA1-207ENST00000533115 UGT2B10P36537 528 aa27.06■■□□□ 1.92
SSSCA1-207ENST00000533115 TESK1Q15569 626 aa27.06■■□□□ 1.92
SSSCA1-207ENST00000533115 PMM1Q92871 262 aa27.06■■□□□ 1.92
SSSCA1-207ENST00000533115 CCDC28BQ9BUN5 200 aa27.06■■□□□ 1.92
SSSCA1-207ENST00000533115 MTHFD2LQ9H903 347 aaPredicted RBP27.06■■□□□ 1.92
SSSCA1-207ENST00000533115 TPT1P8Q9HAU6 139 aa27.06■■□□□ 1.92
SSSCA1-207ENST00000533115 SERINC1Q9NRX5 453 aa27.06■■□□□ 1.92
SSSCA1-207ENST00000533115 AKAP6Q13023 2319 aa27.05■■□□□ 1.92
SSSCA1-207ENST00000533115 CASKO14936 926 aa27.05■■□□□ 1.92
SSSCA1-207ENST00000533115 AQP5P55064 265 aa27.05■■□□□ 1.92
SSSCA1-207ENST00000533115 PLAURQ03405 335 aa27.05■■□□□ 1.92
SSSCA1-207ENST00000533115 MERTKQ12866 999 aa27.05■■□□□ 1.92
SSSCA1-207ENST00000533115 RNPS1Q15287 305 aaKnown RBP27.05■■□□□ 1.92
SSSCA1-207ENST00000533115 GTDC1Q4AE62 458 aa27.05■■□□□ 1.92
SSSCA1-207ENST00000533115 C6orf10Q5SRN2 563 aa27.05■■□□□ 1.92
SSSCA1-207ENST00000533115 PLEKHM3Q6ZWE6 761 aa27.05■■□□□ 1.92
SSSCA1-207ENST00000533115 CMIPQ8IY22 773 aa27.05■■□□□ 1.92
SSSCA1-207ENST00000533115 ARFGAP2Q8N6H7 521 aa27.05■■□□□ 1.92
SSSCA1-207ENST00000533115 ZNF563Q8TA94 476 aa27.05■■□□□ 1.92
SSSCA1-207ENST00000533115 WFIKKN1Q96NZ8 548 aa27.05■■□□□ 1.92
SSSCA1-207ENST00000533115 LIME1Q9H400 295 aa27.05■■□□□ 1.92
SSSCA1-207ENST00000533115 ABCA4P78363 2273 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 A0A1W2PNR3 127 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 C16orf97H3BN30 126 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 ETFAP13804 333 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 AGTR1P30556 359 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 CCKARP32238 428 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 RYKP34925 604 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 CRATP43155 626 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 RAC3P60763 192 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 MAPK11Q15759 364 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 EXOC3L2Q2M3D2 409 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 FCRLAQ7L513 359 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 ABHD3Q8WU67 409 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 CKAP2Q8WWK9 683 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 GTF2H4Q92759 462 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 P2RX2Q9UBL9 471 aa27.04■■□□□ 1.92
SSSCA1-207ENST00000533115 HRGP04196 525 aa27.03■■□□□ 1.92
SSSCA1-207ENST00000533115 RPS4Y1P22090 263 aaKnown RBP27.03■■□□□ 1.92
SSSCA1-207ENST00000533115 APOBEC1P41238 236 aaKnown RBP27.03■■□□□ 1.92
SSSCA1-207ENST00000533115 WDR60Q8WVS4 1066 aa27.03■■□□□ 1.92
SSSCA1-207ENST00000533115 CNOT9Q92600 299 aaKnown RBP27.03■■□□□ 1.92
SSSCA1-207ENST00000533115 NINJ1Q92982 152 aa27.03■■□□□ 1.92
SSSCA1-207ENST00000533115 AURKBQ96GD4 344 aaPredicted RBP27.03■■□□□ 1.92
SSSCA1-207ENST00000533115 KLHL28Q9NXS3 571 aa27.03■■□□□ 1.92
SSSCA1-207ENST00000533115 ST6GALNAC2Q9UJ37 374 aa27.03■■□□□ 1.92
SSSCA1-207ENST00000533115 CELSR1Q9NYQ6 3014 aa27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 PRKD3O94806 890 aa27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 DBIP07108 87 aaKnown RBP27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 IL7RP16871 459 aa27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 DSTNP60981 165 aa27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 GNA13Q14344 377 aa27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 SLC2A7Q6PXP3 512 aa27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 MAGEB18Q96M61 343 aa27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 OR5B2Q96R09 309 aa27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 MED18Q9BUE0 208 aa27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 CCDC106Q9BWC9 280 aa27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 KLHL4Q9C0H6 718 aa27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 PAIP1Q9H074 479 aaKnown RBP27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 CALML5Q9NZT1 146 aa27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 PCDHB14Q9Y5E9 798 aa27.02■■□□□ 1.92
SSSCA1-207ENST00000533115 ADAM11O75078 769 aa27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 ENPP1P22413 925 aa27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 IST1P53990 364 aa27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 POU4F3Q15319 338 aa27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 TMEM201Q5SNT2 666 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms