RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ANXA4P09525 319 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 TPT1P13693 172 aaKnown RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 CXCL3P19876 107 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 VAMP1P23763 118 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 SERPINF1P36955 418 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 SRP9P49458 86 aaKnown RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 RBBP4Q09028 425 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 IRF3Q14653 427 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF791Q3KP31 576 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 SIRPB2Q5JXA9 342 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 CLEC12AQ5QGZ9 265 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 SMYD5Q6GMV2 418 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 ENPP7Q6UWV6 458 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 BHLHA9Q7RTU4 235 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 SLC9B2Q86UD5 537 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 OR10G6Q8NH81 332 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 NFKBIDQ8NI38 313 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 GLYATL2Q8WU03 294 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 SCMH1Q96GD3 660 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 GUCD1Q96NT3 240 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 CPPED1Q9BRF8 314 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 INPP5KQ9BT40 448 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 NDC1Q9BTX1 674 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 GABARAPL3Q9BY60 117 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 NMNAT1Q9HAN9 279 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 RDH14Q9HBH5 336 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 VSX1Q9NZR4 365 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 GPR160Q9UJ42 338 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 GNG8Q9UK08 70 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 SPAG17Q6Q759 2223 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 ZFC3H1O60293 1989 aaKnown RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 A0A1W2PQU0 124 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 URADA6NGE7 173 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 GABRPO00591 440 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 KDELR3O43731 214 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 LILRB5O75023 590 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 FZD7O75084 574 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 UBL3O95164 117 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 EBLN1P0CF75 366 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 SAGP10523 405 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 FDXRP22570 491 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 BUD31P41223 144 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 TAS2R41P59536 307 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 OR2B8PP59922 312 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 TRAM1Q15629 374 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF77Q15935 545 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 GLYR1Q49A26 553 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 FAM74A1Q5RGS3 127 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 HBMQ6B0K9 141 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF761Q86XN6 746 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 ARHGAP12Q8IWW6 846 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 GPR135Q8IZ08 494 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 OR2L5Q8NG80 312 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 OR11H7Q8NGC8 314 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 OR5M3Q8NGP4 307 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 FIBINQ8TAL6 211 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 SDHCQ99643 169 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 HRH4Q9H3N8 390 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 THSD1Q9NS62 852 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF275Q9NSD4 429 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 FBXL3Q9UKT7 428 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 PCOLCE2Q9UKZ9 415 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 GTF2A1LQ9UNN4 478 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 KCNK6Q9Y257 313 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 SNX11Q9Y5W9 270 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 LOXHD1Q8IVV2 1947 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 MGAMO43451 1857 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 A0A087X0M5 115 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 A0A1B0GX30 115 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 TRDV1A0A1B0GX56 115 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 PIPP12273 146 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 ACP5P13686 325 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 ELK1P19419 428 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 CNR1P21554 472 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 GDNFP39905 211 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 PABPC1L2AQ5JQF8 200 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 TMEM69Q5SWH9 247 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 OR5M10Q6IEU7 315 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 KIAA1211LQ6NV74 962 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 TMIGD1Q6UXZ0 262 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 UNC5DQ6UXZ4 953 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF574Q6ZN55 896 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 ATCAYQ86WG3 371 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 LINC00471Q8N535 108 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 OR52E4Q8NGH9 312 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 HGDQ93099 445 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 MED8Q96G25 268 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 MSLNLQ96KJ4 702 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 DUSP22Q9NRW4 184 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 ACSS1Q9NUB1 689 aaPredicted RBP6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 ENPP4Q9Y6X5 453 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 CPSF4LA6NMK7 179 aaKnown RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF729A6NN14 1252 aaPredicted RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 MPTX1A8MV57 137 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 ANKRD66B4E2M5 251 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 LOC730098B7Z3J9 87 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 FAAHO00519 579 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 OR2T1O43869 369 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SCN2BO60939 215 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 RNGTTO60942 597 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms