RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 RPH3AQ9Y2J0 694 aaPredicted RBP21.9■■□□□ 1.1
PVT1-212ENST00000521951 ENPP4Q9Y6X5 453 aa21.9■■□□□ 1.1
PVT1-212ENST00000521951 SPTA1P02549 2419 aa21.9■■□□□ 1.1
PVT1-212ENST00000521951 CPSF4LA6NMK7 179 aaKnown RBP21.89■■□□□ 1.09
PVT1-212ENST00000521951 SHISA8B8ZZ34 492 aa21.89■■□□□ 1.09
PVT1-212ENST00000521951 ETV2O00321 342 aaPredicted RBP21.89■■□□□ 1.09
PVT1-212ENST00000521951 SLC1A3P43003 542 aa21.89■■□□□ 1.09
PVT1-212ENST00000521951 GLYR1Q49A26 553 aaPredicted RBP21.89■■□□□ 1.09
PVT1-212ENST00000521951 SLC25A53Q5H9E4 307 aa21.89■■□□□ 1.09
PVT1-212ENST00000521951 WIPI1Q5MNZ9 446 aaPredicted RBP21.89■■□□□ 1.09
PVT1-212ENST00000521951 FAM180AQ6UWF9 173 aa21.89■■□□□ 1.09
PVT1-212ENST00000521951 ZDHHC21Q8IVQ6 265 aa21.89■■□□□ 1.09
PVT1-212ENST00000521951 SIAH3Q8IW03 269 aa21.89■■□□□ 1.09
PVT1-212ENST00000521951 LSM14AQ8ND56 463 aaKnown RBP21.89■■□□□ 1.09
PVT1-212ENST00000521951 POC1BQ8TC44 478 aa21.89■■□□□ 1.09
PVT1-212ENST00000521951 SLCO4A1Q96BD0 722 aa21.89■■□□□ 1.09
PVT1-212ENST00000521951 ZBTB8AQ96BR9 441 aa21.89■■□□□ 1.09
PVT1-212ENST00000521951 TSPAN10Q9H1Z9 355 aaPredicted RBP21.89■■□□□ 1.09
PVT1-212ENST00000521951 ACKR4Q9NPB9 350 aa21.89■■□□□ 1.09
PVT1-212ENST00000521951 CCM2LQ9NUG4 571 aaPredicted RBP21.89■■□□□ 1.09
PVT1-212ENST00000521951 NDUFAF4Q9P032 175 aa21.89■■□□□ 1.09
PVT1-212ENST00000521951 ZNF407Q9C0G0 2248 aa21.89■■□□□ 1.09
PVT1-212ENST00000521951 MED12Q93074 2177 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 IGSF10Q6WRI0 2623 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 A0A1B0GWA3 101 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 J3KTA2 159 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 WISP2O76076 250 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 FABP3P05413 133 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 RAP2AP10114 183 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 DLX5P56178 289 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 FOXF1Q12946 379 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 TMEM44Q2T9K0 475 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 CMPK2Q5EBM0 449 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 PLEKHM3Q6ZWE6 761 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 OR5M1Q8NGP8 315 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 ZNF300Q96RE9 604 aaPredicted RBP21.88■■□□□ 1.09
PVT1-212ENST00000521951 ADAM19Q9H013 955 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 RPS6KB2Q9UBS0 482 aa21.88■■□□□ 1.09
PVT1-212ENST00000521951 NTN1O95631 604 aa21.87■■□□□ 1.09
PVT1-212ENST00000521951 MT-ND1P03886 318 aa21.87■■□□□ 1.09
PVT1-212ENST00000521951 MAGEA2P43356 314 aa21.87■■□□□ 1.09
PVT1-212ENST00000521951 B3GALT5-AS1P59052 145 aa21.87■■□□□ 1.09
PVT1-212ENST00000521951 NFATC3Q12968 1075 aa21.87■■□□□ 1.09
PVT1-212ENST00000521951 PIN1Q13526 163 aaPredicted RBP21.87■■□□□ 1.09
PVT1-212ENST00000521951 PIWIL3Q7Z3Z3 882 aaKnown RBP21.87■■□□□ 1.09
PVT1-212ENST00000521951 GTPBP8Q8N3Z3 284 aaPredicted RBP21.87■■□□□ 1.09
PVT1-212ENST00000521951 ADAMTS16Q8TE57 1224 aa21.87■■□□□ 1.09
PVT1-212ENST00000521951 C3orf49Q96BT1 292 aa21.87■■□□□ 1.09
PVT1-212ENST00000521951 SNRNP40Q96DI7 357 aaKnown RBP21.87■■□□□ 1.09
PVT1-212ENST00000521951 DUS3LQ96G46 650 aaKnown RBP21.87■■□□□ 1.09
PVT1-212ENST00000521951 MRGPRX4Q96LA9 322 aa21.87■■□□□ 1.09
PVT1-212ENST00000521951 SLC6A15Q9H2J7 730 aa21.87■■□□□ 1.09
PVT1-212ENST00000521951 A4GNTQ9UNA3 340 aa21.87■■□□□ 1.09
PVT1-212ENST00000521951 KMT2BQ9UMN6 2715 aaPredicted RBP21.87■■□□□ 1.09
PVT1-212ENST00000521951 DNAJC13O75165 2243 aa21.87■■□□□ 1.09
PVT1-212ENST00000521951 C7orf72A4D263 438 aa21.86■■□□□ 1.09
PVT1-212ENST00000521951 NPIPA5E9PKD4 350 aa21.86■■□□□ 1.09
PVT1-212ENST00000521951 DIRAS1O95057 198 aa21.86■■□□□ 1.09
PVT1-212ENST00000521951 ITGA2P17301 1181 aa21.86■■□□□ 1.09
PVT1-212ENST00000521951 EIF1P41567 113 aaKnown RBP21.86■■□□□ 1.09
PVT1-212ENST00000521951 TAS2R41P59536 307 aa21.86■■□□□ 1.09
PVT1-212ENST00000521951 MERTKQ12866 999 aa21.86■■□□□ 1.09
PVT1-212ENST00000521951 RAET1LQ5VY80 246 aa21.86■■□□□ 1.09
PVT1-212ENST00000521951 ZNF324BQ6AW86 544 aaPredicted RBP21.86■■□□□ 1.09
PVT1-212ENST00000521951 ZNF613Q6PF04 617 aa21.86■■□□□ 1.09
PVT1-212ENST00000521951 GRINAQ7Z429 371 aa21.86■■□□□ 1.09
PVT1-212ENST00000521951 PAPD5Q8NDF8 572 aaKnown RBP21.86■■□□□ 1.09
PVT1-212ENST00000521951 PRRC1Q96M27 445 aa21.86■■□□□ 1.09
PVT1-212ENST00000521951 CHID1Q9BWS9 393 aa21.86■■□□□ 1.09
PVT1-212ENST00000521951 POLR2J2Q9GZM3 115 aaKnown RBP21.86■■□□□ 1.09
PVT1-212ENST00000521951 POLR2J3Q9H1A7 115 aaKnown RBP21.86■■□□□ 1.09
PVT1-212ENST00000521951 NPIPA1Q9UND3 350 aa21.86■■□□□ 1.09
PVT1-212ENST00000521951 FAM32AQ9Y421 112 aaKnown RBP21.86■■□□□ 1.09
PVT1-212ENST00000521951 LIPGQ9Y5X9 500 aa21.86■■□□□ 1.09
PVT1-212ENST00000521951 PRRC2CQ9Y520 2896 aaKnown RBP21.86■■□□□ 1.09
PVT1-212ENST00000521951 A0A0B4J2E0 115 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 A0A1B0GX12 115 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 OR2M5A3KFT3 312 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 TRAPPC13A5PLN9 417 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 FFAR1O14842 300 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 ENTPD5O75356 428 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 THY1P04216 161 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 RHCEP18577 417 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 ADH6P28332 368 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 TACR3P29371 465 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 SLC7A1P30825 629 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 PRR30Q53SZ7 412 aaPredicted RBP21.85■■□□□ 1.09
PVT1-212ENST00000521951 CYP4Z1Q86W10 505 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 PIGQQ9BRB3 760 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 RIMS3Q9UJD0 308 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 OSGIN1Q9UJX0 560 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 SLC6A5Q9Y345 797 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 EFNA2O43921 213 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 FKBP6O75344 327 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 PRSS23O95084 383 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 OR5F1O95221 314 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 IGHG3P01860 377 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 ZNF17P17021 662 aa21.85■■□□□ 1.09
PVT1-212ENST00000521951 HOXB6P17509 224 aaKnown RBP21.85■■□□□ 1.09
PVT1-212ENST00000521951 HTR3AP46098 478 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms